Salvelinus fontinalis (brook trout): 129857321
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Entry
129857321 CDS
T11136
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129857321
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129857321
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
129857321
NCBI-ProteinID:
XP_055781418
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All DBs
Position
6:20422672..20429065
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AA seq
257 aa
AA seq
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MVSALTRLLLITCVILPFHGAEKLRKALDRKDVEYEKCTGNDADKPNCTRISAESDSRTS
YLNNMYNSCPQGPAGTPGREGNPGTNGIPGTPGIPGRDGIKGEKGECVSEVFEEPWKPNY
KQCAWNSLNYGIDLGKIADCTFTKLRSDSALRVLFSGSLRLKCKTACCQRWYFTFNGAEC
TGPLPIEFIIYLDQGSPELNSTINIHRTSSVEGLCEGIRAGLVDVAIWVGTCADYPRGDA
STGWNSVSRVFIEELPK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggtatcagctctaactcgtctgctgctcatcacctgcgtgattctacctttccatgga
gcagagaaattgagaaaggcacttgacaggaaggatgttgagtacgaaaagtgtactgga
aacgatgcagacaaaccaaactgcaccagaatctctgctgaatccgattcaagaacctct
tatttgaacaacatgtacaacagctgcccccagggtccggctggtacccctggcagggag
ggtaaccctggcaccaatggcatccctgggacccctggcatcccggggcgcgatggcatc
aagggggagaaaggagagtgtgtgagtgaggtgtttgaggagccctggaaacccaactac
aagcagtgtgcctggaactcactcaactatgggatcgacctgggcaagatagctgactgt
acattcaccaagctgcggtcagacagtgccctgcgtgtgctcttcagcggctccctgagg
ctgaagtgtaagacagcctgctgccagcgttggtacttcaccttcaacggagctgagtgt
acaggacctctgcccatcgagttcatcatctacctcgaccaaggcagccctgagctcaac
tccaccatcaacatacacagaacctcatctgttgaagggttgtgtgaggggatccgggca
ggcctggtggacgtggctatctgggtggggacctgtgctgactaccccagaggagacgca
tctacagggtggaactccgtatccagggtcttcatagaggagttgcccaaatga
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