Salvelinus fontinalis (brook trout): 129857343
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Entry
129857343 CDS
T11136
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04621
NOD-like receptor signaling pathway
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129857343
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129857343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfon04054
]
129857343
Pattern recognition receptors [BR:
sfon04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129857343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129857343
NCBI-ProteinID:
XP_055781467
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Position
6:complement(22567749..22575302)
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AA seq
954 aa
AA seq
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MYIMDSSAEEAPAGLTGHVSTVQMLTLHRALLVSQVKSTQCIMDNLLQSGFLCIEDAEII
QRAATKKDQVRKILELVQSKGEQACEYFLYILYKVYDAYIDLQPWLKEINYQPSDFIRDI
PVKNTDPISRYCEKLRHELGRDTRFIASYAQREETLLEELYTDTLMELLNDRNESLGHLE
GLEQLLGEQGVFNSQAETVLITGDAGVGKSILLQKLQRLWSKRELEQTDAMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFSYILRFPEKVLFTFDGYDEIQADLDLGN
VPEVVSPEERTHPLLVLINLLCGKLLNGSRKVLTARTGTEVQSRVIRKRVALRGFSPANL
QTYTNLNFKEQEHRNLVSVQLDASPHLCGLCSIPLFCWIVFKSFKHLRSVYDDFELPEAC
MTLTNIFLLLSEVFLSRGATPPPVLLKRNTRCPADTFRAGLRPLTAFSKLALLGMERGGF
VFDQEDVASCGLTEDDLQVGFLRPVNRYDACDNPSTFEFLHLTLQSFLAAFSLVLDEQAS
VGNILKFFTECSRRANTSCLSCVVHCIAGSSKPRGKDPFKTNEHLQYANLFLCGLLSKAN
AGLLEHMVPATLLKRKRAVLKSYLSTSVRSHLRGLPLYSTEQEGSKVHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVFSGDCSALNFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSIEVLAEELIKYRVVEVLGLYNNHITDIGAKLIAHI
IEECPKLRVVKLGSNKFTSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGARAFAEALRHH
PSLTNLSLSANGITSEGGRSLAEALKGNTMLRIFWLVQNELSDDVAPDMAELIRSNTGLS
HLWLINNQLTVDGIRQLSEALSHNTSLKEISLKGNCLSEEEEKLFEAEGRLRFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtatattatggactccagtgccgaggaagcccctgctggactaacgggccatgtgtcc
actgtccaaatgctcaccttgcaccgtgcgctactggtttcccaggtgaagagcacgcag
tgcattatggataacctcctacaaagtggttttctgtgtatcgaggatgcagaaatcatc
cagcgagcagccaccaagaaagaccaggtgcgtaaaatcctggaattggtccaaagcaaa
ggggagcaggcatgtgaatacttcctatatattctctacaaagtttatgatgcatacata
gacctccaaccatggcttaaagagatcaactaccagccatcagacttcatacgggacata
ccagtgaaaaacacggaccctattagtaggtactgtgagaagctgaggcacgagctgggc
cgagacacacgcttcattgcctcctacgcccagcgagaggaaaccctgctggaggagctc
tatacagacaccctgatggagctcctgaatgaccgcaatgagagcctgggccacctggag
ggtctggagcagctcctgggagagcagggtgtctttaactcacaggcagagacggtgctc
atcacgggagacgctggggtgggcaagtccatcctcctccagaagctccagaggctgtgg
tccaagagggagctggaacagacagacgccatgttcttcttcaagttccgctgtaggatg
ttcagcacattcaaggagacagacgagatctcactcagggacctgcttttcaaatacaac
tgctaccccgaccaggatgcggataatgaggtgttcagctacatcctccgcttccctgaa
aaggttctctttacgtttgatggctatgatgagatccaggctgatctggacctggggaat
gtgcctgaggtggtttctccagaggagaggactcacccccttctggtgctcattaatctg
ctctgtgggaagttgcttaatggttcccggaaggtcctgacggctcggacaggcaccgag
gtccagagcagggtgatccggaagagggtggcgctgcgtgggttctctccggccaacctt
cagacctacaccaacctcaacttcaaggagcaggagcaccggaacctggtctcagtccag
ctggatgccagtccccacctctgtggcctctgctccatccccctcttctgctggatcgtc
ttcaagagctttaaacacctgcgctcagtctacgacgactttgagttgccagaggcttgc
atgaccctcactaacatattcctcctgctgtctgaagtcttcctcagccggggggccact
cccccacctgtcctcctgaagagaaacaccaggtgccccgctgataccttcagggcaggg
ctgaggccgctgacagccttctccaagctggctctgctgggcatggagagaggaggcttt
gtgttcgaccaggaggacgtggcctcctgtggcctgactgaggacgaccttcaggtgggt
tttctccgaccggtcaaccgctacgatgcatgtgacaacccttccacctttgagttcctt
cacctcaccctgcagtccttcttggctgcattctccctggttctggacgaacaggccagc
gtaggaaacatcctcaagttcttcaccgagtgcagcaggagggccaatacttcttgttta
tcgtgtgtcgtccactgcatcgctggctcctccaaacccaggggaaaggacccgttcaag
accaacgagcatctccaatacgctaacctcttcctgtgtggactgctgtctaaggccaac
gccggcttgctggagcacatggttcctgcaacgctactgaagagaaagcgggcggtcctc
aagtcctacctgtccaccagcgtgaggtcccacctccgcggtttgccactctacagcaca
gagcaggagggcagcaaggtgcatgtccttcccaacttcctgtggatgctgcgctgcatc
ttcgagacaggaagtaaagaggtggcacagctgactgcgaagggcatcacagctgactac
atcaagctgggctactgtaatgtgttctctggcgactgcagtgccctcaactttgtgctg
cagcaccggcggaagaggctaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcaggccttcattcagtaagatgaccgtggtgagattgtgtgtcaatcag
atctcagacagcagcattgaggtactggctgaggagcttatcaaatacagagtggtggag
gttctgggactttacaataatcacattacggacatcggagccaagctaatcgctcatatc
attgaggaatgtcctaagttaagagtcgtcaagcttggcagcaacaagttcaccagtgtg
ggtggcaggtatctggccagtgccattcagaagagcacatctatctttgacgtgggaatg
tgggggaacagcattggtgatgaaggagcaagagcattcgcagaggccctgaggcatcac
ccaagtcttaccaacctcagcctctcagccaatggcatcacttcagaaggtgggaggagc
ttggccgaagcacttaaaggcaacacaatgctcagaatcttctggttggtgcaaaacgag
ttgtcagatgatgtagcaccagacatggcagagctgatcagatccaacacaggtctatct
cacctctggttaatcaataatcagctgacagtggatggaatcagacagctgtcagaggct
ctctcccacaacacatcactcaaagagatcagtttgaaaggaaactgtctttctgaagag
gaagagaagctgtttgaggctgagggaaggctacgcttccactga
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