Salvelinus fontinalis (brook trout): 129857469
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Entry
129857469 CDS
T11136
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129857469
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129857469
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129857469
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129857469
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129857469
NCBI-ProteinID:
XP_055781722
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Position
6:complement(25848685..25862329)
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AA seq
442 aa
AA seq
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MFDYIDFLAVGPGETLDFYTASPCMLQEPSLTACFTGLTETDWQIHRIAQSVETQSSSSE
DLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDNN
CIINKITRNRCQYCRLQRCFAAGMSKESVRNDRSKKKEKKETPKMTMIETYELTAELGCV
VENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCIIKVVEFAKRVP
GFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQIHNAGFGPLTD
QVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLEALKIYSRKRR
PSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEMENLEKQKQSE
EEQRADKNITPTHTHSPCPHST
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatagattttctcgcagttggtccaggagaaacgctggacttctatact
gcaagtccttgtatgctccaggaaccatctctaaccgcatgcttcactggactaacagaa
acggattggcaaattcatcggatcgcgcaatctgtggaaacccagagctccagctcagag
gacctgttcgccagtcctctctcacctccgccccctcctcgcacctacaaaccctgcttc
gtgtgccaagacaagtcttcaggctaccactatggcgtcagtgcttgtgagggctgtaag
ggtttcttccgtcgaagtgtccagaagaacatggtttacacgtgccaccgggacaataac
tgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgcttc
gccgcgggcatgtccaaggagtctgtcaggaatgaccggagcaagaagaaggagaagaag
gagactcccaagatgaccatgatcgagacatatgagctgacagccgaactgggctgtgta
gtggagaatatctgtagggctcatagagagaccttcccttccctctgccagttgggcaaa
tacactacaaactcaagctcagacactaggatccagttggacctggggctgtgggataag
ttcagtgagcttgccaccaaatgtatcatcaaggttgtggagtttgccaaacgggttcct
ggcttcaccggcctgactataactgaccagatcaccctcctcaaagcggcctgtctggac
attctgattctgcggatctgtacgaggtacacacctgaccaggacactatgaccttctca
gacgggctgaccttgacccgtacacagatccataacgctggctttggcccgctcacagac
caggtgttcaccttcgcaggccagcttctgcccttggagatggatgacacagaaagtggt
ctactcagcgccatctgcctggtgtctggagaccgccaggacctggaggagccatctaag
gtggaggtcctgcaagagcccttactggaggccttgaagatctactcccgtaaacgccgg
cccagcatgcccctcatgttccccaaggtcctcatgaagataaccgacctgcgcagcatc
agcgccaaaggagctgagcgcgtggtgacgttgaagatggagatcccaggttccatgcct
cctcttatccaggagatgctggaggagatggagaacctggagaagcagaagcagtctgag
gaggagcagagagcagacaagaacatcacacccacacacacacactcgccatgtccacac
agtacatag
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