Salvelinus fontinalis (brook trout): 129857553
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Entry
129857553 CDS
T11136
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129857553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129857553
03036 Chromosome and associated proteins [BR:
sfon03036
]
129857553
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129857553
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129857553
PBAF complex
129857553
GBAF(ncBAF) complex
129857553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129857553
NCBI-ProteinID:
XP_055781884
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Position
6:complement(28253387..28277008)
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AA seq
1094 aa
AA seq
DB search
MATAATAAGGTGSGGPAAGLMGVGTAVGRKKDGGPSSKYWESAETVSQIDSVRQWIGKHY
KKYVQADSPSNKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPTKSFLDFKAGGALCHILG
STYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKTLVQNNCLTRPTVFLVPDMEQKQANK
LKDIIKRHQGSITEDKSKATHHIYPSPTQQEDEEWLRPVMRKDKQVLVHWGMYPDSYDTW
VSTSDVEGDVEDPPISEKPWKVHAKWVLDTDAFNEWMNEEDYEVDENKKTVSFRQRIFPK
EEESSRTPDRKERKANAAGKKRRRSPSPPTTPAESRKKGGKKGNPGSHWKRRGHRGEEEE
EEEEDLTKDMEDPSPVPSMEEVTLPKNVNSKKDNENTPVKGGAVADLDDLEDDSVVSGGK
EEEEQGKAEVNRLIDSSEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKS
KSPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDA
ESRPLPMGPPPTPHFNVLADTPSGLTPMHHRPPQIPSGQQMLNFPEKGKDKPSDMQNFGL
RNDLYSKKNPKSKGTSGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFL
RLPIEDPYLENSESSLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEF
SRVREEVPAELVEAHVKKVQEAARSTGKVDPAYGLESSGIAGTAPEEPEKTEPAETEKVD
TDSDSQQPDKAESKDEAEKPSESAEKLAEGEKVKSETAEPSEREEGESEGGEGKTTADKD
KEEAMETSEDKEKEEQGAMEEERKKLEPDGGEGNIATAAAAALASAATKAKHLAAVEERK
IKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAE
MKARQQMEQQQANTAAQGPAPHHGPPGPGMHHGPSHHGPPPAMHSGHGPPGPGFHPMGPH
HPQQTGPMGGPGQPLPGRMMPGGPPTGSIPPMMGPRHPGAPNGMYPGPSPVQADGMPPAS
VGPQAAAPARVADS
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcaactgcagcgggtggaacgggttcagggggaccagcagccggcctt
atgggcgtcggtactgcggtgggacgtaagaaagatggaggtccttcctcgaaatactgg
gagagcgcagaaacggtctctcagatcgattcggtgcgccaatggatcgggaaacactac
aaaaagtatgtacaggcagactctccctccaataagtccctggcagggctggtggtgcag
ctgcttcagttccaggaagatgctttcggacggagggtgaacaaccctgccctcaccaag
ttacctaccaagagcttcctggacttcaaggcagggggtgctctgtgtcacatcctgggc
tctacctacaagttcaagagcgagcagggctggcgtaggtttgacttgcagaacccctcc
aggatggacaggaatgtagagatgttcttgaatgtagagaagaccctggttcagaataac
tgcctgactcgaccaactgtgttcctggtgcctgacatggagcagaagcaggccaataag
ctgaaggacatcatcaagagacaccagggctccatcaccgaggacaagtctaaggccacc
catcatatctacccctctccaactcagcaggaggatgaggagtggctgcgtccggtcatg
cgtaaggacaagcaggtgctggtgcactggggcatgtacccagacagttatgacacctgg
gtgtccaccagcgatgtggagggggatgtggaggacccacccatctctgagaagccctgg
aaggtgcatgccaaatgggtcctggacaccgacgccttcaacgagtggatgaatgaggaa
gactatgaggtggacgagaacaagaagactgtgagcttccgccagaggatcttcccaaag
gaggaggagtcttcccgtacacccgatcgtaaggagcgcaaggccaacgccgccgggaag
aagaggaggcgctcgccatctcccccgaccaccccagccgagtcccgcaagaagggcggc
aagaaggggaaccctgggtctcactggaagcgtcgtggccaccgtggcgaggaggaggag
gaggaagaagaggacctgaccaaggacatggaggacccctcgcctgttcccagcatggag
gaggtcactttgcccaagaacgtgaactctaagaaagataacgagaacaccccagtgaag
ggaggggcagtggctgatttggatgatctggaggatgactctgtggtctctggaggcaag
gaggaggaggagcagggcaaggccgaggtcaaccgcctcatcgactccagcgaggacaac
gtgaccgagcagacccaccacatcatcatccccagctacgccgcctggttcgactacaac
tgtatccatgagattgagaggcgtgcactgccggagttcttcaacggcaagaacaagtcc
aagtccccagaaatatacctggcctaccgtaacttcatgatcgacacgtaccggctcaac
ccccaggagtacctgacctccacctcctgccgcaggaacctgaccggagacgtgtgtgcc
gtcatgagggtgcatgcgttcctggagcagtgggggctggtgaactaccaggtggatgct
gagagccggcccctccccatgggccccccacccaccccccacttcaacgtgctggctgac
accccctctggcctgacgccgatgcaccaccgccccccacagatcccctccggccagcag
atgctcaacttcccagagaagggcaaagacaagccctctgacatgcagaactttggcctg
cgtaacgacctctactccaagaagaaccccaagagtaaaggaaccagcggcggccgggag
tggaccgagcaggagactctgctcctattggaggctctggagatgtacaaggacgactgg
aacaaggtgtcggagcacgtgggctcgcgcacccaggacgagtgtatcctgcacttcctg
cgtctgcccatcgaggacccttacctggagaactctgagtcgtccctgggccccctggcc
taccagcccgtacccttcagccagtcaggcaaccctgtcatgagcaccgtggccttcctg
gcctccgtggtggacccccgtgtggcctccgccgccgccaaggcagccctggaggagttt
agccgtgtgcgtgaggaggtgccagcagagctggtggaggcccatgtgaagaaggtgcag
gaggcggcccgcagcacgggcaaggtagaccccgcctatggcctggagagcagcggcatc
gcaggaactgcccccgaggagcccgagaagaccgagccagcagagaccgagaaggtggac
acagactccgactcccagcagcctgacaaggctgagtctaaggacgaggcggagaagccc
agtgagtctgctgagaagctggccgagggagagaaggtgaagagtgagacggccgaaccg
tctgaacgggaggagggcgagagtgagggaggagagggcaagactacagcagacaaagac
aaggaggaggccatggagacttcagaggacaaagagaaggaggagcagggagcgatggaa
gaggagaggaagaagctagagccggacgggggggaggggaacattgccactgcagccgcc
gctgccctcgcctcagctgccaccaaggccaagcacctggcggcggtggaggagaggaag
atcaagtctctggtggctctgctggtggagactcagatgaagaagctggagatcaagctc
agacactttgaggagctggagaccatcatggaccgagagaaagaggctttggagttgcag
aggcagcagctgctgacggagcgccaggccttccacatggagcagctgaagtatgctgag
atgaaggcccgccagcagatggagcagcagcaggccaacacagcggcccagggccccgca
ccccaccatggtcccccagggccaggcatgcaccacggaccctcccaccacggaccccct
cccgccatgcactccggacacggcccccccggacccgggttccaccccatgggtccccac
cacccgcaacagaccggaccaatgggagggcccggtcaacccttaccaggacgcatgatg
cctggcggcccccccactggcagcatccctcccatgatgggtccccgccaccctggagcc
cccaacggcatgtaccctggcccctcgcctgtacaggctgatggtatgcccccagcgtct
gtgggacctcaagcggcagccccagcacgagttgctgacagctaa
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