Salvelinus fontinalis (brook trout): 129857567
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Entry
129857567 CDS
T11136
Name
(RefSeq) tubulin beta-4B chain-like
KO
K07375
tubulin beta
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon04517
IgSF CAM signaling
sfon04540
Gap junction
sfon04814
Motor proteins
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129857567
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129857567
09144 Cellular community - eukaryotes
04540 Gap junction
129857567
09142 Cell motility
04814 Motor proteins
129857567
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129857567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129857567
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129857567
04147 Exosome [BR:
sfon04147
]
129857567
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
129857567
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
129857567
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129857567
Exosomal proteins of colorectal cancer cells
129857567
Exosomal proteins of bladder cancer cells
129857567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
DUF5008
Motif
Other DBs
NCBI-GeneID:
129857567
NCBI-ProteinID:
XP_055781945
LinkDB
All DBs
Position
6:28806443..28821950
Genome browser
AA seq
459 aa
AA seq
DB search
MVHCLCVSKYLPVKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDGDLQLDR
ISVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
TEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT
FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLN
HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTV
PELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNIQNKNSSYFVEWIP
NNVKTAVCDIPPRGLKMSVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEM
EFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEDDDA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactgtctctgtgtctcaaaatatctaccagtcaagatgagggaaatcgtgcat
atccaagccggccagtgcggtaaccagattggcgccaagttctgggaggtgatcagcgat
gagcacgggatcgaccccacaggcacctaccatggagatggcgacctgcagttggacaga
atcagtgtgtactacaacgaggcaacaggtggtaaatatgtacccagggccgtcctcgtg
gaccttgagcctggcaccatggactctgtgaggtctggaccctttggacagatcttcagg
ccagacaactttgtgtttggccagagcggtgctggtaacaactgggcaaagggccactac
acagagggagcagagctggtggactctgtcctggatgtagtgaggaaggaggcagaaaac
tgtgactgcctgcagggattccagctcacccactccctgggtggaggcacggggtcgggt
atgggcaccctgctcatcagcaagatcagagaggagtaccctgaccgcatcatgaacacc
ttcagcgtggtgccctcaccaaaggtatcagacacagtggtggagccatacaacgccacc
ctctcagttcaccagcttgtggagaacacagacgagacgttctgcattgacaacgaggcc
ctttatgacatctgcttccgcacgctcaaactgactacgccaacctacggtgacctcaac
cacctggtgtcagctaccatgagcggcgtcaccacctgcctgcgcttccctggccagctc
aacgctgacctccgcaaattggccgtcaacatggtgcccttcccccgtctgcacttcttc
atgcccggcttcgcccccctcaccagcaggggcagccagcagtaccgtgccctcaccgtg
ccagagcttacccaacaggtgtttgacgcaaaaaacatgatggccgcctgcgaccctcgt
cacggccgctaccttactgtggccgcagtgttccggggccaaatgtccatgaaggaggtg
gacgagcagatgcttaatatccagaacaagaacagcagctacttcgtggaatggatcccc
aacaacgtgaagaccgctgtctgcgacatcccaccccgcggcctcaagatgtctgtcacc
ttcatcggcaacagcacagccatccaggagttgttcaagcgtatctctgagcagttcacc
gccatgttccgccgcaaggccttcttgcactggtatactggagagggcatggacgagatg
gagttcactgaggcagagagcaacatgaacgacctggtgtctgagtaccagcagtaccag
gacgccaccgctgaggaagagggagagttcgaggaggaggctgaagacgatgacgcttaa
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