Salvelinus fontinalis (brook trout): 129857573
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Entry
129857573 CDS
T11136
Name
(RefSeq) valine--tRNA ligase-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129857573
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129857573
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129857573
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
129857573
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129857573
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129857573
Prokaryotic type
129857573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
Val_tRNA-synt_C
tRNA-synt_1e
Jag_N
GST_C_7
Motif
Other DBs
NCBI-GeneID:
129857573
NCBI-ProteinID:
XP_055781954
LinkDB
All DBs
Position
6:28878201..28891686
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AA seq
1279 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRPCTLIEDPPASMALCSRPSLVLGSGGGEVLSG
ASAVAWYLASQGKRIGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKSMQL
QQSSHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRKALTNV
TRWFLTCVNQPQFVKVLGQISLCEKMVPVTPKPSAAPVPAANANPTADANAANGKPKTEA
QLKKEAKNREKLEKFQKKKEMEEKKKQEKKLAPPTEKKAKPEKKDLGVISYDVPTPPGEK
KDVLSPLPDSYSPQYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGS
LHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGR
DQFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEDGVIY
RSKRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEV
IVATTRIETMLGDSAVAVHPADPRYQHLKGKRVLHPFCDRKMPIVFDEFVDVNFGTGAVK
ITPAHDHNDYEVGNRHKLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGHFK
ETKDNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFN
WLDNIRDWCISRQLWWGHRIPAYFVTVTDPSVTPGEDMDGHYWVSGRTEEEARDKAAKRF
NVSTDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLSVFYPGSLLETGHDILFFWVA
RMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQD
SNLDPVEVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCN
KLWNAVKFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCTAVGLCNAGFQAYDFPAIT
TAIYNFWLYELCDVYLESVKPVFSRAEEDSGSQSQAVVCRQTLFTCLETGLRLLAPIMPF
VGEELYQRLPRRRPQDGHPSIHVMPYPETEEFCWHSEDVDRKMEFVMTVVRTIRSLRADY
NLTKTRADCYLQCIDSETMSLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRC
TVHLMLKGLIDLEKEVAKLTVKKGELEKQMDKLREKMDKSDYKEKVPVKVQELDTEKLRQ
SQTELEKAMEAIDNFKRMV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctctacgtctccccccaccctgacgacttcaggagcctcatggccctggtt
gctgcagagttctgcccctctcggccctgcacactcatagaggaccctcctgcctccatg
gccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctctggg
gccagtgccgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgctaaa
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggtgttcccactgctgggggtgatgggagtggataagaagtccatgcagctt
cagcagagttctcatgctgagatgatgcgcgtgctaaacgttctagataagaacctggag
cctagaacattcctggtgggagacagcctcactctggccgacatcgctgtggcaaccgca
gcactcctgcccttcaaatacgccttggagccatccaacaggaaagccctgacgaacgtg
accaggtggtttctgacctgtgtcaaccagcctcagtttgtcaaggtcctgggacagatc
tctctgtgtgagaagatggtgcccgtcacacccaaacccagcgctgctcctgttcctgct
gctaacgctaatccaactgctgatgccaacgctgccaatggcaaaccaaagacagaagct
cagctgaagaaagaggctaaaaacagagagaagctggagaagttccaaaagaagaaggag
atggaggagaagaaaaagcaagaaaagaaactggcacccccgacagagaaaaaggccaaa
ccagagaagaaggacctgggagtgatctcatacgacgtccccacccctcctggagagaaa
aaagatgtcctgagccccctgccagactcgtacagtcctcagtacgtggaggcagcctgg
tactcctggtgggagaagcagggatacttcaagcctgagtacgggcggaagagtatcagt
gagccgaatccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacgggatct
cttcacttaggccatgccctaaccaacgccatccaggactgtctgaccagatggcaccgt
atgcgtggcgagacgaccctgtggaacccaggctgtgaccacgcgggtatcgccacccag
gtggtggtggagaaaaaactgatgcgggagaggggcatgagccgtcacgacctggggaga
gatcagttcatccaggaggtctggaagtggaagaacgagaagggagaccgtatttaccac
cagctgaagaagctgggttcctctctggactgggacagagcctgcttcaccatggaccct
aaactgtcctatgcagtccaggaggcgttcattcgtctgcatgaggacggcgtgatctac
aggagcaagaggctggtcaactggtcctgcaccctcaactctgccatctcggatattgag
gtggataagaaggagctgactggcaggactctgctgcccgtgcctggctacaaggacaag
gtggagtttggagtactggtctccttctcctacaagatagagggatcagatgaggaggtg
attgtggcgaccactcgtatagagaccatgctgggagattctgctgtggccgttcaccct
gccgaccccagataccagcaccttaaagggaagagggtgcttcatcccttctgtgacagg
aagatgcccatcgtgtttgatgagtttgtggacgtcaactttggaacgggtgctgtgaag
atcaccccagcccatgaccataatgattatgaggttggaaacagacacaaactggccttc
atcaacatcctggatgagaacggcctgctcatcaacgtgccggctccattcctgggtatg
aaacgtttcgaagcgaggaaggctgtgctgcaggctctgaaggacagaggccatttcaag
gagaccaaagacaaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggag
cccctgctgaagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgac
tcggtccgggagggaagactcaaaatcatcccagaccaccaccataagacctggttcaac
tggttggacaacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatc
ccagcctactttgtcaccgtgaccgacccttcagtcacaccaggagaggacatggatggt
cattactgggtgagtgggaggacagaggaggaggccagagataaagctgccaagcgcttc
aatgtctccactgacaagatcaccctcagacaggatgaggatgtactggatacatggttc
tcctctggtattttccccttctccatcttcggctggcccaatgagacccaggacctgagt
gtgttctatccaggcagcctgctggagacaggtcatgacatcctgttcttctgggtggcc
cgcatggtgatgatgggcctcaaactcactggcaagctgcccttcaaagaggtgtacctc
catgcggtggtgagagacgcccacgggaggaagatgagcaaatctctgggtaacgtcatc
gaccctctggatgtcatcacaggaatctctctggagggtctgtatgcccagctgcaggac
agtaatctggacccagtagaggttgagaaggccaagcagggacagaagtctgactacccc
actggtatcccagagtgtggcacagatgccctccgcttcgccctgtgtgcctacaccagc
caaggcagggacattaacatggatgtgaatcgtatccttggttaccgtcacttctgtaac
aagctgtggaatgctgtgaagtttgccatgaggacgctgggagacaactttgttccttca
gagaaagcccagctgtgtggggaggagagtgtgtcagaccggtggattctgtcccgtctg
tgtactgctgtgggtctgtgtaatgcagggttccaggcctacgacttcccagctatcacc
acagccatctacaacttctggctctacgagctctgtgacgtctatctggagagtgtgaag
ccagtgttctccagggcggaagaagacagtgggtctcagagccaggctgtagtctgcaga
cagactctgttcacctgcctggagaccggcctgcgcctcctagctcccatcatgcccttc
gtgggcgaggagctctaccagaggttgccacggcgacgaccccaggatggccaccctagt
atccatgtcatgccctaccctgagactgaagagttttgctggcacagtgaggatgttgac
cgtaagatggagtttgtgatgaccgtggtccggaccatccgttcactcagggccgactac
aacctgaccaagacacgtgccgattgctacctccagtgtatagacagtgagacgatgtct
ctggtggagcagtacagtctgcagatccagaccctgtctctttcccagaccatccagccc
gtcccagccaccggggccgtcccagagggctgtgctgtggccattgcctccgacaggtgc
accgtccacctcatgctcaaaggtctgatagacttggagaaggaggtggccaagctgact
gtgaagaagggagagctggagaaacagatggataaactgagagaaaagatggataagagt
gactacaaagagaaggtgcctgttaaagtacaggagctggacactgagaagctgcgtcag
agccagacggagctggagaaagcaatggaagccatagacaacttcaagagaatggtgtaa
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integrated database retrieval system
