Salvelinus fontinalis (brook trout): 129857607
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Entry
129857607 CDS
T11136
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129857607 (dhx32b)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129857607 (dhx32b)
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129857607 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
129857607
NCBI-ProteinID:
XP_055782018
LinkDB
All DBs
Position
1:53155479..53162651
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AA seq
733 aa
AA seq
DB search
MAQGKTGEKYWEDRVAFETEGAGQEVVEYGDVLELNRFDGLPYSSRYYTLLKERMDLPVW
KAKCDFMDKLANRQFIIVSGTARTGRSSQIPQWCAEFCLSVQYQNGMVVCTQVHRQHTVD
LALRVADEMDVNIGHEVGYSIPLETCCSGDTVLRYCTDDMLLREMMSDPMLEHYGVIVID
QAHERTVSTDVLLGLLKDITLQRPELRVVLLTATHPGPKLLGHYRNVPLIQLEGVCSAEV
VYTGTSHKDYFCSALRLVLEIHHSQEEGDIVVFLATTQEIDLARDILLREEVNIPPHLGE
LLPISVHPGLGGTLPMPGEEEGRCRRVFLTSSPNEDLFWAVHMLNFVIDAGVQKRNVYNP
RIRANSVAIQPISRIQAESRKQLVGPTGKSFCLYPEDTPLPSETRPHILESDITSTVLFL
KRMDIGGLGRCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKT
LLASCEFDCVNEVVTIVAMLTAPSCFLVPSRELRLEASQCHLKFQHPEGDHFTLINIYKA
FKQNQHEPFVSVEKWCQDYFLSLSALQTADAIRSELTDILRRIELPVSMPSFGSKGNTLN
IKRALLAGFFMQVARDVDSSGNYFMLTHKHVAQIHPFSAYGTKTPKLGLPEWVLFHQYSF
SEDNCIRTVSHISPEEFIQMAPQYFFFNLPPSESKDILQNILDNGAEHYKAKKIQKSPGL
ESIPEVTASCVIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggcaaaaccggagagaaatattgggaggatagagtagccttcgaaacagaa
ggagcaggtcaagaagttgtagaatatggtgatgttttggagcttaatcgatttgacgga
ctaccctactcctctcgatattacacattactgaaggaaaggatggatctgccagtttgg
aaagccaagtgtgatttcatggacaagctggccaacaggcagtttattattgtctctggc
actgcaagaactggcagaagctctcagattccccagtggtgtgcagagttctgcctgtct
gtccagtaccagaatggcatggtggtgtgcacccaggtccacaggcaacatacagtggat
ctggccctgcgtgtagctgatgagatggacgtcaacattggccatgaagtgggctacagc
atccccctagagacatgctgctctggtgacactgttctcaggtactgcactgatgacatg
ctgctcagagagatgatgtcagaccccatgctggagcactacggcgtcatcgtcatcgac
caagcccacgagaggacggtcagtacagatgttctactgggccttctcaaagacatcacc
ctgcagaggcccgagctccgcgtggtgctcctcacagctacacacccaggacccaaacta
ctgggccactacaggaatgtcccactgatccagctggagggggtatgttcagcggaggtg
gtgtatactggtaccagccacaaggactacttctgctctgccctgcgtctggttctggag
atacaccactcccaagaggaaggggatatagtcgtgtttttggccacaactcaagagata
gatcttgcccgtgatatcctccttcgcgaggaggtcaatatacccccacatctaggggaa
cttctccctatctcggtgcaccctgggctgggtggaactctgcccatgccgggtgaagag
gaaggccggtgcagaagagtattcctcacctccagtccaaatgaagacctcttttgggct
gtgcacatgctgaactttgtcattgatgccggtgtccagaaaagaaatgtttataaccct
aggatcagggcgaactcagtcgccattcaacctatcagtcggatccaagcagaaagccgc
aaacagcttgtaggaccaacagggaagagtttttgtctgtacccagaggacacacccctg
cccagtgagacacgcccccacatccttgagtctgacatcacatccacggtgctcttcctg
aagaggatggacatcggcggtctgggccgctgtgactttatcgacaggccagatcctgag
ggtctgatgcaagccttggaggaactggactatctagcagccctggatgacgatgggaac
ctgtcggagatcggcatcatcatgtctgagttccccctggagccccagatggccaagaca
ctactggcctcctgcgagtttgactgtgtcaacgaggtggtcaccatagtcgccatgctg
acagcaccaagctgcttcctggtcccctcaagggagttgaggctagaggcctctcagtgt
cacctgaagttccagcacccagagggagaccacttcaccctcatcaacatctacaaggct
ttcaaacagaaccagcatgagccttttgtcagtgtggagaagtggtgtcaggactacttc
ctgagtctgtctgccctgcagacggctgatgctatccgctctgagctgactgacatcctg
aggaggatagagctgcctgtctccatgccttcctttggctccaagggaaacactctcaac
attaagagagcgctgctagctggcttcttcatgcaggtggcaagggatgtggattcatca
gggaattacttcatgttgacacacaagcacgtggcccagatccaccctttctctgcctac
ggcaccaagacacccaaactgggcctgccggagtgggtcctcttccatcagtactccttc
tcagaggacaactgcatccgcaccgtgtcccacatatcaccagaggagttcattcagatg
gctccacagtacttcttcttcaacctgcctcccagcgagagcaaggacatcctccagaac
atcttagacaatggagctgaacactacaaagcgaagaagattcaaaagagccccggccta
gagagcataccagaagtcaccgccagttgtgtcatacaatga
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