Salvelinus fontinalis (brook trout): 129857816
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Entry
129857816 CDS
T11136
Name
(RefSeq) triadin-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129857816
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129857816
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
129857816
NCBI-ProteinID:
XP_055782395
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Position
6:39334944..39368273
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AA seq
782 aa
AA seq
DB search
MTREEELIRIAKKLDKMVSRNNTDGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNEMKNGVDSNKSTASPVRSPLEKDTSHKRL
DVSDSDPESEKEEYSDKWQKEKHNVEHKKDERAVDLKKERNTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLEKPKKERHFEKSRKERHVPIHETKNERHVQEPKKKSNLEEPKNESHTD
EPRRERFADELRKERHTEERRKEIPMYEPRQERPVENHRQGFERRSVLDDLYPACYSPPR
PPRPPRLPPPVRRMSGEVNKGVKKEVKKERERRDSSDTLSPSHPRPTPPSRRSSVKGKKE
RKKDPPDPNSLLPPLHPHPSMPTAAEVKKERKEPLRISVVRKEPPDPNAPFAPLPLHLHP
PPHVKRPSVEVKKEREESSDYKPVSLKVTSSDHVKKDRKDSDSKVPKKTSVDAKKERKDL
SDSKPKPAKRQSLDSSDSNPKRSKRPSLDGKKDRKDSTDSKPSHSVKRHSTDSKSDRRDS
VDSKTSNSPSAKKLSSETKEFHGSKSSHNGPLQRKSSTDSIERRGKPEMPKIPSTPTSPM
SPSFSSAGVPLSPCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIEDHIYTE
MGSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIMSAEEMASDELKQLRNN
LTKEAIREHQLSKTSGTISDLFQCSKCNKKNCTYNQMQTRSADEPMTTFVLCNECGNRWK
FC
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggatagcaaaaaagctggacaagatggtgtctaga
aataacacggacggtgccctggacctgctgaatgaactgaagagcttcaacatgacgctg
aaacttctgcaggaaacgaggatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtcgtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaatgagatgaagaatggggttgactccaac
aagtccacagcgtctccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagatcctgaatctgaaaaggaagaatactctgacaaatggcaaaaa
gagaagcacaatgttgaacacaaaaaagatgagagagctgttgacctaaaaaaggagcga
aatacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttagaaaaacccaaaaaggagagacac
ttcgaaaaatccagaaaagaaagacatgtacctatacatgaaacaaaaaatgaaagacat
gtgcaagaacccaagaaaaaaagtaatctcgaagaacccaaaaatgagagccacacagac
gaacccagaagggagcgttttgcagatgaactgagaaaggaaagacacacagaggaacgc
agaaaggagataccaatgtacgaaccccgacaagagagacctgttgaaaaccacagacaa
gggtttgagaggagaagcgtcttggatgatctttaccccgcttgttactctcctcctcgc
cccccccgaccaccccgccttcctccccctgtcagacgtatgtctggggaggtgaataaa
ggggtgaaaaaagaggtgaagaaggagagagagaggagagattcttcagacactctgtct
ccttctcatcctcgtcccacccctccgtccagacgttcctcagtgaaggggaagaaagag
aggaaaaaagatcctcctgaccctaattccctgcttcctcctcttcatcctcatccttct
atgcccactgcagcagaggtcaagaaggagagaaaagagcctctgcggatttctgtggtt
cgaaaagagcctccggaccccaatgctccatttgctcctcttcctctccatctccatcct
ccccctcatgtgaagcgcccgtcagtggaagtcaaaaaggagagagaagagtcgtcagat
tacaaacccgtttctctgaaggtgacgtcctctgaccatgtgaaaaaagatagaaaagac
tccgatagcaaagtgcccaaaaaaacatctgttgatgccaagaaagaaagaaaggatttg
tcagattccaaaccaaaacctgctaaaaggcagagtctggactcctcagattccaatcca
aaacgttctaaaaggccaagtctggatggcaagaaagacagaaaggactccactgactcc
aagcccagccattctgtgaaacgtcattcgactgactccaaatcagacaggagggactct
gtggattccaagactagcaactcaccctcagctaagaagctctctagcgagacgaaagaa
tttcatggctccaagtcctctcacaatggccctctgcagagaaagtcctcaacggacagt
attgaacggagagggaaaccagagatgccaaagatcccctccacccccaccagtcccatg
tccccctccttcagctcagcaggggttcccctgtccccttgccttgccactggagaaacc
atcagggacaagtgcattgagatgctggctgctgctctacgtacagatgacaacttcaaa
gaatttgggacaaactgtgactccatggcagcagagattgaagatcatatttacacagag
atgggatccacagatatgaagtataaaaacagggtgcggagccgcatcagcaacctgaag
gaccccaaaaaccctggactgcggaggaacgtcctggctggaggcatcgagctgagacgc
ttcgccatcatgtctgctgaggagatggctagtgatgagctgaagcagctcaggaacaat
ctgactaaggaggccattagggaacaccagctgtccaaaaccagcggtaccatttctgac
ctgtttcagtgcagcaagtgcaacaaaaagaactgcacctacaaccagatgcagacccgc
agcgctgatgagcctatgactacttttgttctgtgtaacgagtgcgggaaccgctggaag
ttctgctga
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