Salvelinus fontinalis (brook trout): 129857851
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Entry
129857851 CDS
T11136
Name
(RefSeq) AF4/FMR2 family member 2-like isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129857851
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129857851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
129857851
NCBI-ProteinID:
XP_055782463
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All DBs
Position
6:42654402..42828481
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AA seq
1348 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRSALKKREWERRTQEVQQDEDLFSSGFNLFGEPYKTE
ATSLSTLGGTNNLNKTNKGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQT
PGPSFFTEGAQRTSSRTSTGHNTTSMPPPPSSSSLTSSTRLSSHQSSKKSRSSDWLQGAH
CSSSTSTQEVGGQVVGVPTSSRGKHLSTHEQQQQQPQRHEELFSSQGDVVGHKGDSSSSP
NSSTSRRHGGGQQQAPSAAEHGGYKDSNNHVKSPLEQEPGSHGSISPVASTSLLPSGLST
PTFPQGLHVKPSAVQQQKPTAYVRPMDGQDQVPLDSPELKPPLEVGDMGYSNLAFGSTTT
SSKSKLPKLTLTQTGEVSLSSDSSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFPIPSK
ESQHLPSGYAGQKRCNVPCNKPATKSVPQKSMLEDDLKISSDEEDTDQQLSSIQDLRPAA
EKPKPRSTPLIIPVATSRTTDPGLSSGASGSSSESESSSESDSDSESSSSDSECNGASRT
ATPEPEPPSTNKWQLDKWLNKVTPHNKALINTQPERESHGLSSSQPDHSQQAPEGQGPAP
GKSKPGPTALLAPTDPKERALLSPIREKAKPKTGPKVSEGKGSKVKSPAVVAVEPAPARR
SLGKKQPKKVERSSSLEEHTSWSKPINPIISTTPKEKDPPSLLEQPKSRTKSTSGKTAPR
KEPRTTTTTTITPAPLPLAPVLEKKKHRGPSKIIPKSKEFIETESSSSECHSEPEELVKI
HNPPCPGPSSLQTLKAAKDCNSNILTVSSLTSTCSSSISIPDPGAMDLLGDPLFSSVPIV
QNKLLSPLRDFEDIKSLWVKIELSFLSKIPGQDPPEPPSVKVEPREPREPSIKHRRQSPA
SLQSTPVEKPPSKAKRKHKMDHCDAVGGSKKLRLEKDSLLLPPCISPIHNHKNISTNDSL
RKQPRKREEKRELLPPLLSPLSDEPPIRQRRTSECSSFSQEGGASSATSTLLLPTLSCSL
PNFSSSSSSSSHKHRSKGESKSFSRSKTSSEEDTHSKPSGSFHGNGHSDSDVWSNPSSLS
MDHMEPRRPKLTFNNTVHNADYCMQEAKKLKHKADALMEKFGKAINYTDGALSFIECGNA
MERDPLEAKSPYTMYSETVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLYLRMFK
LKKDHAVKYSRSLMEYFKKSSQAPSPWGANGKSTGTPSPLSLSPSPVSSVSSSTGPGLAG
SCPSGASSNVAIPQRIHHMAASHVNITNNILRSYEHWDTAEKLATESQEFFQELDSTMEP
LSQHSSMTELVRYIRQGLHWLRIEAHML
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggactgggaactggagcaacagtgtcattac
gagcaggaccgcagtgcgctcaagaagagggagtgggagcggcggactcaggaggtgcag
caggacgaagatctcttctcctccgggtttaatctgttcggggagccatacaagacagaa
gcaaccagtctatccactttgggggggaccaacaacctaaacaagaccaacaaaggtgat
gccctggccaaccgggtacagaatactctggggaactacgatgagatgaaggagctcctg
accagccactccaaccagagccacctggtggggatccccaagaactctgttccccagacc
cccggccccagcttcttcaccgagggggcccagaggacgagcagcaggacgagcacgggg
cacaataccacctccatgccccctccgccctcctcttcctccctgaccagctccacccgg
ctgagcagccatcagagctccaagaagtcccgctcctccgactggttgcagggagcccac
tgctccagcagcaccagcacacaagaggtgggggggcaggtagtaggggtaccaaccagc
agcaggggaaaacacttgtctacccatgagcagcagcagcagcaaccccagagacacgag
gagctgttcagctcacagggcgacgtcgtgggccacaagggagactccagcagcagcccc
aactcctccacctccaggaggcatggcggtgggcagcagcaggccccttcggcggctgag
catggcggatacaaggacagcaacaatcatgttaagtctcccctggagcaggagccgggc
tcccacgggtccatttcccccgtggcctccacctccctgctgcccagcggcctttccacg
ccaaccttcccccagggcctgcacgtcaagcccagcgccgtgcagcagcagaagcccacg
gcctacgttcggcccatggacggccaggaccaggtgcccctggactccccggagctcaaa
cctcctctggaagtgggggacatgggctacagcaacctagcctttggcagcaccaccacc
agctccaagagcaagctgcctaagctgaccctgacacagactggggaggtcagcctgtcc
agtgactccagctgtgtggaggagattctacgggagatgacccactcctggcctcctccc
ctgactgccatccacactccaggcaaagctgagcagaccaagttccctattccctccaag
gagtcacaacacttaccctcaggatacgctggacaaaagcggtgcaatgttccctgtaac
aagcctgcaaccaagtctgtaccacagaagtcaatgcttgaggatgacctgaagatcagc
agtgacgaagaggacactgatcaacagttatcatccattcaggaccttcgaccggcagca
gaaaagcccaagcccagaagtacacctctcatcatccctgtggccacgtctcggaccact
gacccgggcctctccagcggtgcctcgggcagctccagcgaatcagagagcagctccgag
tcagactcagatagtgagagcagctccagtgacagcgagtgtaacggggcctcccggacc
gccaccccagagcctgaacctccatcaacaaacaaatggcagctggataaatggctgaac
aaagtgaccccacacaacaaagcacttatcaatacccagccagagagagagagccatgga
ctcagcagctcccagcctgaccacagccaacaggccccagagggccagggcccggcccca
gggaagagcaagcctggccccaccgccctgctggccccgaccgaccccaaggaacgggcc
ctcctcagccccatcagagagaaggccaagcctaagactggaccaaaagtctcagaggga
aagggttcaaaggtcaaatccccagccgtggtggcggtggagccagccccagccaggcgc
agcttggggaagaaacagccgaagaaagtggagcgctcgtccagcctggaggaacacacc
tcctggtccaagcccatcaaccccatcatcagcactacccccaaggagaaggaccctcca
tccctcctggagcagcccaagtccaggaccaagagcaccagtgggaagactgcccctagg
aaggagcctcgcaccaccactaccactacaattactccagctcctcttcccctggcccca
gtcctggaaaagaagaagcacagggggcccagcaagatcatccccaagtccaaggagttc
atcgagacggagtcttcgtcatctgagtgccactctgaaccagaggagctggtcaagatc
cataaccctccctgtccaggacccagcagtctgcagactctcaaagcagccaaggactgc
aacagcaatatcctgactgtcagtagccttaccagcacctgcagctcttccatatccatc
ccagaccctggggccatggacctcctaggggaccccctcttctcctctgtccccatcgtc
cagaacaaactgctgtcccctctcagggactttgaggacatcaagtcactgtgggtgaag
atcgagctgagcttcctgtctaagattccagggcaggacccccctgagcccccttctgtg
aaagttgagccccgggaaccacgtgaacccagcattaagcacagacgacagtcccccgcc
agtcttcagtctacccctgttgagaaaccacctagcaaggccaagaggaaacacaagatg
gaccattgtgacgctgtcggcggaagcaagaagctacggttggagaaagactccttgctt
cttcccccatgcatctcaccgatacacaaccacaagaacattagcacaaacgactctctg
aggaaacagcccaggaagagagaggagaagcgagagctgctgcctcccctgctttctccg
ctctccgacgaaccccctatacgccagcgcaggaccagcgagtgttcctccttcagccag
gagggcggtgctagcagcgccaccagcaccttattgctacccaccctcagctgctctctg
cccaacttctcctcctcatcctcctcttcctcacacaagcaccgcagcaaaggagagagc
aaatccttctcacgttccaagacaagcagtgaggaagatacccatagcaagccgtctggc
agtttccatggcaacggtcactccgattctgacgtttggtccaacccgtcatctctgtcc
atggaccacatggagcctagaaggcccaagctaacgttcaataacacagttcacaacgca
gactactgcatgcaagaagccaagaaactaaagcacaaagcagatgcactgatggagaag
tttggcaaagccattaactatactgatggggcgctgtcgttcatcgagtgtggcaacgcc
atggagcgggatccgctagaggccaagtctccatacactatgtactctgagacggttgaa
ctcatcaggtatgccatgaggttaaagaactttacgagtcactcagcaactgtagccgag
aagaaattagctgtgttgtgcaatcgctgtttatccctcctgtacttgagaatgttcaaa
ttgaagaaggaccatgcagtaaagtattcccgttccctaatggagtatttcaagaaaagt
tcccaagcaccttcgccatggggagccaatggaaagagcacaggcaccccgtcgcccttg
tctctgagtccctccccagttagttcggtgagcagcagtacgggccctggccttgcgggc
tcctgtccctccggtgcctccagcaatgtggccatcccccagcgcatccatcatatggcc
gctagccacgtcaacatcaccaacaacatcctccgcagttacgagcactgggacacggca
gagaagctcgccacagagagccaagagttctttcaggagctggactcgacgatggaaccg
ttgagccaacacagcagcatgacagaactggtgcgctacatacgccaaggactgcactgg
ctacggatagaggcccacatgttatag
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