Salvelinus fontinalis (brook trout): 129857879
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Entry
129857879 CDS
T11136
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129857879 (slit3)
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Axon guidance molecules
129857879 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_2
hEGF
LRR_9
LRRNT
Laminin_G_1
LRRCT
EGF_TEN
EGF_DL_JAG
JAG1-like_EGF2
LRR_NXF1-5
EGF_Teneurin
EGF_CA
LRR_EndoS
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
129857879
NCBI-ProteinID:
XP_055782521
LinkDB
All DBs
Position
6:complement(44114234..44316572)
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AA seq
1532 aa
AA seq
DB search
MLPTVQEKWTAYHWGIWVLMCGLLCSAAVNGCPHKCSCSGSHVDCQGQGFRTVPKGIPRN
AERLDLDRNNITRITKVDFSGIKNLRVLHLEDNQITVIERGAFQDLKQLERLRLNRNKLQ
VLPELLFQSTPKLGRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRD
LEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRHGLAPFTQC
MAPASMRGLNIPDVQKKDFTCTGPAQAEPRTCIPQASVCPISCTCNNNIVDCRHKGLTEI
PANLPEGIVEIRLEQNLIKNIPAGAFSPYKKLKRIDLSKNQISDIAADAFTGLRSLTSLV
LYGNKIAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLNLLSLYDNKLQTISKG
LFAPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGK
KFRCTGTEDYRSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTKLPPHLPEHTTDLRLND
NEISILEAAGTFKKLPNLKKINLSNNKLRDIREGAFDGAGGVLEVLLTGNRLQALQGRMF
RGLTGLKTLMLRSNQIGCVDNTTFTGLSSVRLLSLYDNRISTIAPGAFTTLHSLSTINLL
SNPYVCDCHLAWLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVANPDFTCDGTEENVCFP
VSRCPESCTCSDTVVRCSNRGLRTLPKGIPKDTTELYMEGNLLMSIPKELSTLKQLSLVD
LSNNSISTVASMAFSNMTQLATLILSYNQIRCIQVHAFDGLKSLRLLTLHGNDLSTIPEG
AFNHLTSLSHLALGANPLYCNCDLRWLSQWVKAGFKEPGIARCSGPPDMADRLLLTTPLN
RFQCKGPVDINLMAKCAPCLAGPCLNNGTCASDVSGSYHCTCPIGYKGQNCEIAINACIS
FPCANGGTCHLMPGQVEQFSCTCPPGYEGLQCEVNPDDCEDNDCENNSTCVDGINNYTCV
CPPNYTADRYDMGKGDLCEEVVDNCMQGFDPCQHDSKCIPLAKGFRCECLPGYVGQHCEQ
DYNDCLENKCQHGAECVDAVNGYTCVCKEGFSGLFCENPPPMILLQTSPCDQSECQNGAQ
CLVVEGEPVCRCLPGFTGNKCHKIVTVHLLGKETYLELPSIKIRNSVHISLQVATDKDNG
ILLYKEDHDPLALELYQGHIRIIYDIANYPPTTVYSVESVSDGLFHTVELLIQNHSLSLV
VDKGSPKSLGKLPRQPSVDHNTQLYIGGVPSAVMASGLRSGPDRSPQAFNGCIHNVRING
ELQDLGAALRGLEGILPGCHSCSVCAQGACRQRGETGVSCECPPSRSGPLCDQRIAPSPC
QSSRCVHGLCVPKASSYSCHCADGYTGQYCDRREEPQACKGHQCGHGECRVTESGEPSCH
CQPGYTGPTCDAEPACQGEVVRELLKRHQPMKTCTSTSKIPRVECPRACDGGFCCTPSKS
RRRKVVFKCTDGSSYSEEMETTLECGCAKCPL
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgactgtgcaggagaagtggacggcgtatcactgggggatatgggttctgatg
tgcggattgctgtgctctgccgcggtgaatggatgtcctcacaaatgcagttgctctgga
tctcatgtggattgccagggtcaaggcttcaggaccgtgcctaaaggaatacctaggaac
gcggagcgtttggatttggacaggaataacatcaccaggatcactaaagttgacttttct
ggcatcaagaacctgcgagttctgcacctagaggacaaccagatcacagtgattgagagg
ggggcgttccaggacctcaaacagctagagagactgcgtctgaaccggaacaagctgcag
gttctcccagagctgctgttccagtccacacccaagcttggccgcctagacctcagtgag
aaccagatccaggcggttcctcgtaaggctttccgtgggatcacaactgtcaaaaacctg
caactggacagcaaccacatcagctgtatcgaagatggagccttccgagccctgcgcgat
ctggagatactcaccctcaacaacaacaacatcaccctcatccctctgtccagcttcaac
cacatgcccaagctgcggactctgcgtctgcactctaacaatctgcactgcgactgccac
ctgtcctggctgtccgactggctgcggcagaggcatggcctggcccccttcacccagtgc
atggcccccgccagcatgaggggcctcaacatccctgatgttcagaagaaagacttcacc
tgcacaggcccagctcaggcagagcctcgtacctgtattccccaggcatcagtatgtccg
atctcctgcacctgtaacaacaacattgtggattgtcgccacaagggcctgactgagatc
cctgccaacctgcccgagggcatcgtagagattcgtctggagcagaacctgatcaagaac
attcctgctggagccttctctccatacaagaaactcaagaggatcgacctgagcaagaat
caaatctctgatatcgccgccgatgccttcactggcttacgctccctgacttcactggtc
ctgtacgggaacaagatagctgagattcctaagggcctgtttgatgggcttgtctctctt
cagctactgctcctgaacgccaacaagatcaactgtctgagggtgaacaccttccaggac
ctgcagagcctcaacctgctgtctctgtacgacaacaagctgcagaccatcagcaagggc
ctgttcgccccgctccgctccatcaagactctccacctggctcagaaccctttcatgtgt
gactgccatctcaagtggctggctgactacctgtttgacaaccccattgagaccagcgga
gcccgctgtagccacccccgtcgcctggccaacaaacgcatcagccaggtcaagggaaag
aagttccgttgtacaggtacagaggactaccgtagcagattgagtggagagtgtttccag
gacctggtgtgtccagagaagtgtcgctgtgagggcaccgtggtggactgctccaacctc
aaactgaccaaactgcctccacacctccccgagcacaccacagacctgcgcctgaacgac
aacgaaatctccatcctggaggccgcggggacttttaagaagctccccaacctgaagaag
attaaccttagcaacaacaagctgagggatatccgtgagggggcctttgacggagccggg
ggggtcttggaggttctgctgactggcaacaggctgcaggctttgcagggacgcatgttt
agaggtctcactggactcaagaccctgatgctgaggagtaaccagataggctgtgtggac
aacaccactttcacaggcctgagctctgtacgtctgctgtccctctacgacaaccggatc
tccaccatcgccccgggagccttcactacactgcactccctctccaccattaacctgctc
tccaacccctatgtgtgtgactgccacctggcctggctgggtctgtggctgaagaagacc
agggttgtgagtgggaaccctcgctgccagaaacctgccttcctcaaggagatcccaatt
caggacgtggctaaccctgattttacctgcgacggcactgaggagaatgtgtgttttccg
gtgtctcgctgcccagagtcgtgcacatgctcagacacagtggtgcgctgcagtaaccgg
gggctgcgcactctgcccaaaggcatccccaaggacaccactgagctatacatggaaggg
aacctcctgatgtccatccccaaagaactgtccacacttaagcaactatctcttgtagac
ttaagcaacaacagcatcagcaccgtggcctccatggccttcagcaacatgactcagctc
gccactctgatcctgagttacaaccagattcgctgtatccaagtacacgcatttgatgga
cttaaatctctgcgcctcctgactctccacggaaatgacctttcaactataccagaggga
gccttcaaccatttgacatctctgtctcatctggctttgggtgccaaccccctgtattgt
aactgtgacctgcgctggctgtcccagtgggtgaaggctggcttcaaggagcctggcatc
gcccgctgttccggaccacctgacatggccgaccgcctgctgctcaccacgcccctcaac
cgcttccagtgcaaaggtccagtggatataaatctgatggcaaagtgtgctccctgtctt
gccggcccctgtctgaacaatggcacatgtgccagcgatgttagtggctcctaccactgc
acctgtcccattggctacaaaggtcagaactgtgagatagccatcaacgcctgcatcagt
ttcccctgtgccaacggggggacctgccacctgatgccaggccaagtggaacagttcagc
tgtacgtgtccacctggctacgagggtctacagtgtgaggtgaacccagatgactgtgag
gacaatgactgcgagaacaactccacctgtgtggacggcatcaacaactacacctgcgtc
tgcccccccaactacacagctgacagatatgatatgggaaaaggggacctatgtgaggag
gtggtggacaactgtatgcaaggcttcgacccctgccagcatgactccaagtgcatcccc
ctcgccaaaggcttcaggtgtgagtgcttgcccggctacgtgggccaacactgtgagcag
gactacaacgactgtctggagaacaagtgtcagcatggggccgagtgtgtggacgctgtc
aacgggtacacctgcgtgtgtaaggagggctttagtggtctattctgcgagaaccctcct
cctatgatcctgctgcagaccagcccatgtgaccagtcagagtgtcagaatggtgcccag
tgtctagtggtggaaggggagcctgtgtgtcgctgcctgccaggcttcaccggaaacaag
tgccacaagatcgtcaccgtccacctcttgggcaaagagacctacctggagctgcccagc
atcaagatacgcaactctgtccacatctccctacaggtggctacagataaggacaacggt
attctgctctacaaggaggatcatgatcctctagctctagagctgtaccagggacacata
cgcataatctacgacatcgctaactacccgccgaccaccgtctacagtgttgagtctgtg
agtgacggtctattccacacggtggagctcctgattcagaaccactctctgagcctggtg
gtggacaagggatcccccaagagcctgggcaagctgccccgccagccctctgtggaccac
aacacacagctctacataggaggtgtgccctcagcggtaatggcgtccggactgcgttca
ggtcccgatcgcagcccccaggccttcaacggctgcatccacaacgtcaggatcaacgga
gagctccaggatctgggggcagcgctgcgcgggttagaaggcatcctgccaggctgccac
tcttgcagcgtgtgtgcccagggcgcctgcagacagaggggggagacgggtgtgtcctgt
gagtgcccacccagccgcagcggacccctctgtgaccagaggattgcccctagcccctgt
cagagcagcaggtgtgtccatgggctgtgtgtgcctaaggcgtcgtcctacagttgtcat
tgtgctgacggctacacagggcagtactgtgacaggagagaggagccccaagcttgtaaa
ggacaccagtgtggacacggggagtgtagggtcacagagagcggggagccctcctgccat
tgccagccgggctacactggccctacctgtgacgcagaaccggcgtgccagggagaggtg
gtgcgtgagctgctgaagcggcaccagcccatgaagacgtgcacctccaccagtaagatc
ccccgggtggagtgtccccgcgcctgcgacggaggcttctgctgcaccccatccaagagc
cggaggcggaaagtggtcttcaagtgcaccgacggatcctcgtactctgaggagatggag
accaccctggagtgtggctgtgccaagtgcccgttgtaa
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