Salvelinus fontinalis (brook trout): 129857996
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Entry
129857996 CDS
T11136
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04210
Apoptosis
sfon04218
Cellular senescence
sfon04620
Toll-like receptor signaling pathway
sfon04621
NOD-like receptor signaling pathway
sfon04622
RIG-I-like receptor signaling pathway
sfon04623
Cytosolic DNA-sensing pathway
sfon04625
C-type lectin receptor signaling pathway
sfon04920
Adipocytokine signaling pathway
sfon05132
Salmonella infection
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129857996
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129857996
04218 Cellular senescence
129857996
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129857996
04621 NOD-like receptor signaling pathway
129857996
04622 RIG-I-like receptor signaling pathway
129857996
04623 Cytosolic DNA-sensing pathway
129857996
04625 C-type lectin receptor signaling pathway
129857996
09152 Endocrine system
04920 Adipocytokine signaling pathway
129857996
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129857996
09171 Infectious disease: bacterial
05132 Salmonella infection
129857996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129857996
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
129857996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
129857996
NCBI-ProteinID:
XP_055782798
LinkDB
All DBs
Position
6:complement(49178247..49212090)
Genome browser
AA seq
913 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFPPMSLTNSLRTADGPYLQIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVSKTLEDRMTEAYRMGYNCGIVIHPEIDAIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGSGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDSDMGDDPSSGAVVADRAQSEDDASTGETKCVLEAR
LVDVAERQAEALFHYAVTGDVHYLMAPQRHLMTAQDENGDTGLHLGVIHSQTDAVRSLAQ
VLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGADVTLSDRHGNTALHLATQ
QKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSLRDLLVSGGNVEVQERSC
GRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAAGRGSVKLTALLMAAGAN
PHKENFEPLFFREDDCCVDEEEEQDEGYIPGMTPLNMAATAEVLEILNGKEYKPETTIPV
FIPPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILNSAFRLSPSPASTLLDSY
EVSGGMVMDLLEGLRMVDNSTALTVLQGALCKTEQAPLAPQSTTELLGRVPDLKLDGQED
SGVCDSGVELSTA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctgcctcacccacagtactatgacatagagccaatatgg
gatcctctgaatttccctcccatgtcactcaccaactcactccggacagcagatggaccc
tacctccaaatcattgaacagcctaaacagcggggcttcaggttccgttatggctgtgag
gggccctctcacggtgggctcccaggggcctccagcgagaagaacaggaagtcatatccc
caggtcaagatctgcaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagtttccccaacctgggcatcctc
cacgtgaccaagaagaatgtgagtaagacactggaggaccgcatgactgaggcctacagg
atgggttacaactgtggcattgtcatccaccccgagatagacgccatccagggagaggtt
cgcatcccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagcgtggtgcgcctcatgttcacagccttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagaccccattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctacctgctctgtgacaaggtccagaaagatgacatccaggta
cgcttctatgaggatgacgagaccgggctgacatgggaggcctttggggacttctccccc
actgatgtgcatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcccttcacctaccacccacagatcatagataaggaagaggtgcagaggaag
agacagaagaccctgcctaatttccaggactacagcggccaaggtggatcagggggcatg
taccggggaccagggggaggaggctccgctacggggggaggacccggctcaggtggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggcggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgacagcgacatgggcgatgacccgtcctcgggggcagtggtggcggac
cgagcccagtcggaggacgatgcctctactggggagacaaaatgcgtgctggaggccagg
ctggtggatgtggctgagaggcaggctgaagccctcttccattatgccgtcactggagac
gtccactacctgatggctccacagcgccacctcatgacggctcaggacgagaacggcgac
actggtctccatctgggggtgatccacagccagacagacgcagtcaggagtctagcccag
gtgctctctgccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagact
cctttgcacctagcggtgataacccagcagaaggaggcagccgaggccctcgtattggct
ggggctgatgtcactctgtctgatcgccacggaaacacggctctacacctggccactcag
cagaaggagggagggatggtgggatttctactaagacacagagaggtggtggaactagtg
gacctccccaacacagcaggattttgctccctccacctggctgtgctggccaacagccta
tgttccctcagggacctcctggtgagcgggggcaatgtggaggtccaggagaggagctgc
ggccgcacggcactccacctggccactgagctggacaacgtctccctggcaggctgcctg
ctactggaggggaatgctgatgtggactgttgcacctacaacggctccagccctctccac
atagcagcaggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaat
cctcacaaagaaaactttgagcccctgttcttcagagaggatgactgctgtgtggatgag
gaagaggaacaggatgaaggctacatcccagggatgactcctcttaacatggctgccact
gctgaggtattggaaattctgaatggcaaagagtacaagccagagaccaccatcccagtc
ttcatcccccctcaaggcgacatgcggagcctgggctcagacacaaagcgggcattatgc
caggcacttgagtgccagggagggagctgggagagcctggcaaacacgctggggctgggc
atcctcaacagtgccttcagactcagcccctcccccgccagcacactgctggacagctac
gaggtgtctgggggaatggtcatggaccttttggagggactcaggatggtggataactcc
accgcgttgacagtactgcagggggcactgtgtaaaacagagcaggctcctctagctccc
caaagcaccacagagctcttaggacgtgtcccggatctgaagctggacggacaggaggac
agcggcgtgtgtgacagtggggtggagctctccacagcgtga
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