Salvelinus fontinalis (brook trout): 129858077
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Entry
129858077 CDS
T11136
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129858077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129858077
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129858077
04031 GTP-binding proteins [BR:
sfon04031
]
129858077
Membrane trafficking [BR:
sfon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
129858077
Others
Specific organelles associated proteins
Auto phagosome
129858077
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129858077
GTP-binding proteins [BR:
sfon04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
129858077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
G-alpha
PduV-EutP
ATP_bind_1
TniB
Septin
AAA_22
Motif
Other DBs
NCBI-GeneID:
129858077
NCBI-ProteinID:
XP_055782983
LinkDB
All DBs
Position
6:complement(51719581..51722902)
Genome browser
AA seq
243 aa
AA seq
DB search
MASVESSMEFTSSLTVSSHLPPPRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPEKTEATI
GVDFREKLIEIDGETIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTSAASFRSLP
TWIEECKQHALGQEVPRILVGNKCDLQNSVQVGTDLAQQFADAHSMPLFETSAKNPSSDG
SGDSIRGSSDHVEAIFMTVAHKLKSQKPLILSQLPRGVLGGDTVTLIRGRDEGEEKVSWT
CSC
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgtggagtcgtcgatggaattcaccagttcgctgactgtctcgtctcatctt
ccgcccccacggacacggattttcaagatcatagtgattggagactccggggtgggcaag
acctgcctcacctaccgattctgtgcgggcaagtttccggagaaaaccgaggccacgatc
ggggtggactttcgggagaaacttatcgagattgacggagagacaatcaaggtccagcta
tgggacacggcgggccaggagcgttttcgtaagagtatggtacagcactactaccgcaac
gtgcacgctgtggtgtttgtgtacgacgtgaccagcgccgccagcttccgcagcctcccg
acctggatcgaggagtgtaagcagcacgccctgggccaggaggtcccgaggatcctggtg
gggaacaagtgtgacctgcagaactctgtccaggtgggcacggacttggcccagcagttt
gccgacgcccactctatgcccctgttcgagacgtccgccaagaaccccagcagcgacggt
agcggtgacagtatccgggggagcagcgatcacgtggaggccatcttcatgacggtggcc
cacaagctgaagtcccagaagcctctgatacttagccagctgcccaggggggtgttaggg
ggggacacggtaaccctgataagggggagggacgagggcgaggagaaggtgagctggacc
tgcagctgctga
DBGET
integrated database retrieval system
