Salvelinus fontinalis (brook trout): 129858138
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Entry
129858138 CDS
T11136
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129858138
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
129858138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
TPR_GEMI5
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
129858138
NCBI-ProteinID:
XP_055783102
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All DBs
Position
6:53933298..53946061
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AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCSELQGPGTPQCFSVRTDTGTVFIASEYSVTELDPRAGQVMNEVSLTAE
RYLPEDGSGTVVGIQDLPDQESVCVATATGDVILYNLSTNQLECVGSVNSGLTAMSWSPD
QELVTLTTGQDTIIMMTKNFEPIIEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
KKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPQTGARMVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKALLWNSDST
VLAVWLEDMTREEGGQVNTYIQLWTVGNYHWYLKQSLYFGSDPQRAPADVSWDPERPLGL
HLVTRGWASLTYDWGWSTDRSHGEDGQDNANVAVIDGDKVLVSTFRQCVVPPPMCAYELQ
LPAPVNLVTFHRQPQRTNELAALTADGHILVYGQGTGDQSDPTARVGGFRSITHAPQLKT
TYRVLLDQEEPLALRLLLWLRGDVFLGVGGCAGGPSQSTLLILGPSEAQSPQSTLEIKSR
VEVEGHVISMCHSSNTGTVALQLEDGQIRKFLWDSLKPSVVGWQNVTGYSINFPDPCVQT
ALCTIEKENLLGLTDRSHLFVDDTEVASNVSSFVVYDDFLLLTTHSHTCRCLRLSTLTVK
GLQVALAADGGQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQ
LRKCLDSQKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPYPSNAIGQSAPGACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPGAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDGPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEAVRALQAFVSSASW
RNALCVAEQIPLPPDQLALLARDLAEKLIELRRYTEAAILLEQYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQRAMFIRHKTRLAVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMSGSRAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKGLMLFQFDGQAGRLQQAYGEALQMIEV
ALPEVWQEGLQQSQAPITGPNSTANSIMASFQQPRPSSTQDSETPPPPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgaggttgctgaagagccttcgttgctcggagctgcagggcccgggcacg
ccgcaatgtttctctgttcggacagacacaggtacggtgttcatcgcttcagaatactcc
gtcaccgagttggacccacgagctggccaggtgatgaatgaggtgtcgttgacagctgag
cgctaccttccagaggatggcagtgggacagttgttggtatccaggacttaccagaccag
gagtctgtgtgtgttgctacagccactggtgatgtcatcctctacaacctcagcactaac
cagttggagtgtgtgggcagtgtgaacagtggtctaacagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcatagaggttgggatccatcaggatgactttggagaggggaagtttattaca
gtgggctgggggaagaaagagacccagttccatggctcagagggcaagcacgctgcccag
aagaagaccatagaggtgcagccagccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagatggccagctcttcgctgtgagctctgtttgcccccagactggtgccaga
atggtcagagtttggaacagagaatgtgtcttgcagtcaacaagtgaaactgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcagccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaatggcctcctacacggggacttcacc
ctgccttttggcaaagaacaggtcaaggtgaaggcattgctgtggaacagcgactctact
gtgttggctgtgtggctagaggacatgacacgagaagaggggggccaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagagcctatactttggc
agcgacccccagagggcgccagctgacgtgagctgggatcctgagaggcccctggggctg
cacctggtgacccgaggctgggctagcctgacctacgactggggctggagcactgaccgc
agccacggggaggacgggcaggacaacgctaacgtggctgtgatcgatggagacaaggtc
ctagtgtcgacatttcgtcagtgtgtggtgcccccacccatgtgtgcctacgagctccag
ctgcccgcccctgtcaacctggtgaccttccaccgccagccccagagaaccaatgagctg
gcagcactcaccgccgacggacacatcctagtctacggtcaaggtactggggaccagagt
gaccctactgccagagtgggaggattccgatctatcacacacgctcctcagttaaagact
acctacagggttttgttggatcaggaggagcccctggctctgcgtctcctgctgtggctg
aggggggatgtgttcctgggggtggggggctgtgcaggtgggccgtcccagtccacgctg
cttatcctgggaccctcggaggcccagagcccccagtcaaccctggagatcaagtcacgt
gtggaggttgaaggtcacgttatcagcatgtgtcacagctccaatacgggcacagtggcc
ctgcagctggaggacggccagatcaggaagttcctctgggactccctgaagcctagtgtg
gtgggctggcagaacgtgacaggctacagcatcaacttcccagatccctgtgtgcagacg
gccctctgtactatagaaaaggagaatctgctggggcttacagaccgatctcacctgttt
gttgacgacacagaggtggcctccaacgtctcctccttcgtggtctacgatgacttcctg
ctactcaccacacactcgcacacatgccgctgcctccgactcagcacactcactgtcaaa
gggctgcaggtggccttggctgcagacggaggtcagaatgaccagaatgacgagactctc
cgcagggtggaaaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccaccatcgagcgctggtattggctcag
ctcagaaagtgtctggacagtcagaagttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatttacgaccacaaccccaaggtgtttttagagagcgtggag
accttcctgagacagctagactctatcaaccacatcaaccttttcctcacagagctcaaa
gaggaagataccactacgacaatgtacccatacccatcgaacgctataggccagtcagcg
cctggggcttgtgggaagaaggttgacattgtttgtgatgcactacgctgcaccatggaa
tctatggaccaacacaagtactgcctgtctatcttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccggtgca
gccaacgcggtgagtgcggaggaggctctgaagtacctgttgttcctagtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtagctgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaatatgctgaagactctagag
cccaactaccagcgctacaccatcgacaaacacctgaagagatacaggaaggccctgcac
cacctcagcaagtgtggtgaggagcacttcaccgaggccctaaatctggtgaaggaccag
aggctgtatagtgaagccctagggctctatccaacagacggccctcagtacaaggccttg
agctgtgcctacgctgagtacctggtggagcagcagcaggcagagcaggcagggttgttg
ctgtggcgctgcggcgaggcagtccgtgccctccaggccttcgtgagcagtgccagctgg
aggaacgccctttgtgtggcagagcagataccccttccacctgatcagctggcactgctg
gctagggacctggcagagaaactgatagagctcagaagatatacggaggcagccatattg
ttggagcagtatgctaaggactgtgaggaggccatctcggctctgatcacaggtgcagtc
tgggaagaagcacttcgactggtgtatttgtacaacagacaagacatcattgaaacgaac
ctcaaaccagctctcttggaagcatgtagttctcagacctcctacctggaagctcagagg
gcgatgttcattcgtcacaaaacccgtctggccgtggtacgggagcttaaggaaaaggcc
aggctggagttactggatgaggatgtcccagactgtccagaggcagagctctactcagag
gccagtagtgtgatgtccggcagccgtgccggctccaagtactcacatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggctgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaggaggtgcacagcctgctgaagggcctgatgctgttccagttt
gacggacaggcggggaggctgcaacaggcctatggggaggctctccagatgattgaggtg
gcccttcctgaagtttggcaggagggtcttcagcagagtcaggctccgattaccggtcct
aactccacagccaatagtatcatggcttcatttcaacagccaagaccctcatcaacccaa
gattcagagactcccccacccccaaagatgagaaatggtgtcaagtggaaactgagtatt
ttgaagtag
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