Salvelinus fontinalis (brook trout): 129858139
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Entry
129858139 CDS
T11136
Name
(RefSeq) TBC1 domain family member 2A-like isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129858139
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129858139
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
PH_8
PH_3
Motif
Other DBs
NCBI-GeneID:
129858139
NCBI-ProteinID:
XP_055783105
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All DBs
Position
6:complement(53908748..53933095)
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AA seq
1007 aa
AA seq
DB search
MTCYYLENEFKTSRVMEGEDPEGNPSTASSHSLPPQAEAVSPADEDDCITTGRNSEETAT
HTNSMGQPSQDHQSEGVPAKTAATDNNQSQSATTMDNQAQQQPTECLSNTKLCGYLLKQG
GPLKSWKSRWFTYEEKKSQLFYYRTAQDVTALGRIELCRATFGYPLHGEQGTFHIQTPER
TFILKADNQEAMMYWLQQLQLKRWQHRDQLTGESTRHCTDHQRPEGQGELPTSCPDDFLP
TMKTPPGLLGEEAANLPAPQQRAPLSNFSLKHPLIEIQNSVHSLFYKRSSQELSRSVFHL
EAPPPWTPLNPSKTPYQTAQDRLDPRTPVDPPTPTTPLLLTDPAGERSPGGGRLFPCPSP
RIRRKTRGSSATMPAALREAASDKTTRLQQEKHMLAEEVKAQKELVWLLHKALEAAQLEK
RTCTEFLAAECEQERLELLRHRERQAADLQGRLEELKAEAEGLRASLAQRDAHVAELQEN
VTLMMAKNHSKQEVILKLSEQVAACMTDPRRTVSTTNGLEALTFHQLQEDTENLKDDIEA
YKIQNKFLNSEIYQLTKLWRNSSEQEKSLMVKCAYLEARNCQIESRYLGVLRKLQESKDL
EPGQREAVRNLIEDALKGDLNDVLELNPVREHDEYGFKIIPDYEVEEMKLLAKIQALEIR
SHNLLRQEAGVRPLLDRWAQYLGGRPADDLCPSPELKFLLRCGVPREYRPRVWRWVVRAR
TRSLRERHPDRYEQLCQKSLTSPHQASRQIQLDLHRTLTTNQRFSSPSSPTLQQLQRILL
AFSWQNPTIGYCQGLNRLAAIALLVLESEEDAFWCLVAVVETIMPQDYYTKTLIASQVDQ
RVLKDFMAEKMPRLTAHFEEHSVDVSLITFSWFLVVFVESLPSDILLRVWDAFLYEGTKV
IFRYALALFKYKEEDILNIHDNVEIYQYLRFFTKTISDGRKLTNIAFSDMNPFPMKLLKN
RRVLHLERLQGELRELEAQQREFVTESAERKDKDLDTILVSEDDEDL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgacatgttattacttggagaatgagtttaaaacgagtagagtgatggagggagaggac
ccagaaggaaatcccagcactgcctcgtctcactcacttcctccccaagcagaggcggta
agcccagcggatgaggatgattgtatcacaacagggaggaactctgaagagaccgctaca
cacacaaacagcatgggccagccgagtcaggaccaccagagtgaaggtgtcccagctaag
actgctgccacagacaacaaccagagtcagtctgccaccaccatggacaaccaagcccag
caacaacccacagaatgcctgtctaacactaaactatgtgggtatctccttaaacaagga
ggtcccctgaagtcgtggaagtcgcgctggttcacgtacgaggagaagaagagccagttg
ttttactacaggacggcgcaggatgtgaccgctttggggaggattgagctgtgcagagcc
acgttcggttaccccctccacggagagcagggcacctttcacatccagacccctgaacgg
accttcatcctcaaggcagataaccaggaggccatgatgtactggctacaacagctgcag
ctgaagagatggcagcaccgagaccagctgacaggagaatccacacgtcactgtactgac
caccagagaccagagggacagggggaactacccaccagctgcccagatgacttcctgccc
accatgaagaccccgccaggcctcttgggcgaggaggctgccaatctgcctgcaccgcaa
caacgggcccccctaagcaacttctccctcaaacatcctctgatagagattcagaactcg
gtgcacagtcttttttacaagcggtcctcccaggaactaagtcgtagtgtgttccatttg
gaggcgcctcctccctggaccccactgaacccatcaaagaccccctaccagacagcccag
gacaggcttgaccctaggactcccgttgaccccccgactcctaccaccccgctgctgttg
acagaccctgcgggtgagcgctcccctggggggggcaggttgttcccatgcccatccccg
aggatcaggaggaagacgaggggcagctctgccaccatgcccgctgcgctacgggaagct
gcttcagacaagacaacccgccttcagcaggagaaacacatgctggctgaggaggtcaag
gcccagaaggagctggtgtggcttctccacaaggccctggaggcggctcagctggagaag
cggacctgcaccgagttcctggcagccgagtgtgagcaggagcgtctggagctattgagg
caccgcgaacgccaagccgctgacctgcagggtcgtctggaggagctgaaggccgaggcg
gagggtctgagggcgagcttggcccaaagggacgcccacgtggccgagctgcaggaaaac
gtcacactgatgatggcgaagaaccactccaaacaggaggtgatcctgaagctgtcagag
caggtggcagcctgcatgaccgaccctagacgcaccgtgtccaccactaatggcctggag
gccctgaccttccaccagctgcaggaggacactgagaacctcaaggatgacattgaggcc
tacaagatccagaacaagttcctgaactctgagatctaccagctgaccaagctatggcgc
aacagttcagagcaggagaaaagccttatggtaaagtgtgcctacctggaagcccgtaac
tgtcagatagagagtcgttacctgggtgtactgaggaagctgcaggagagcaaggatcta
gaaccgggccagcgggaggctgtgaggaacctcatagaggacgcactgaaaggagacctg
aacgacgtccttgaactcaaccctgtcagggagcatgacgagtatggcttcaagatcatc
ccggactatgaggtggaggagatgaagctgctggccaagatccaggccctggagatccgc
tcccacaacctgctaaggcaggaggccggggtcagacccctgttggaccgctgggctcag
tacttgggcggccgcccggccgacgacctctgcccctccccggagctcaaattcctgctg
cggtgtggcgtgccacgggagtaccgcccacgggtgtggcgctgggtggtgagggcacgc
acacgctcgctgagggagcgtcacccggatcgctatgagcagctgtgccagaagagcctt
acgtcaccccatcaagcctccagacagatccagttggacctacaccgcacgctcaccacc
aatcagcgcttttcctcaccctccagccccactctgcagcagctccaacgaattctgcta
gctttctcctggcaaaaccccaccattggctactgccagggcctcaacaggctggcagcc
atagctctcctggtgctggagagtgaggaggatgccttctggtgtctagtagctgtggtg
gagaccatcatgcctcaggactactacaccaaaacactcatagcctcgcaggtggaccag
cgcgtgctgaaggacttcatggcggagaaaatgccccgactgacagcccactttgaggag
catagtgtggacgtgtccctcatcaccttcagctggttcctggtggtgttcgttgagagc
ctgcccagcgacatcctcctgcgggtgtgggacgccttcctctacgagggaaccaaggtg
atatttaggtatgccctggctctgttcaagtacaaagaggaggacatcttgaacatccat
gacaacgtggagatctaccaatacctgcgcttcttcaccaagaccatctctgacggcagg
aaactgaccaacatagccttcagcgacatgaacccgttccccatgaagctgttgaagaac
cggcgtgtgctgcatctggagcgcctgcagggggagctcagagagctggaggcccagcag
agggagtttgtcacagagagcgcagagcgtaaggacaaggacctggacactatactagtc
agcgaggatgatgaggacctgtag
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