Salvelinus fontinalis (brook trout): 129858176
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Entry
129858176 CDS
T11136
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129858176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129858176
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129858176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
End3
Motif
Other DBs
NCBI-GeneID:
129858176
NCBI-ProteinID:
XP_055783173
LinkDB
All DBs
Position
6:56032169..56054824
Genome browser
AA seq
1521 aa
AA seq
DB search
MSFIDLNDDQRWVPTHVNVTVLRARGLRTKGKHGGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEDGGRSVFPSGSGDLVLTIMHRVLIGLDVFLGQAILPLDKIFQD
GMCPRDEWLKLNSKAGRKEKERGEMQVTVQFTRNNLTASMFDLTMKDKPRSAFGKLKDRV
TGRKIGDMESSSAIVPGRFAALSGSLGKPFREGDRGEGGEDPVEVAEEKRSKVKDFFKGK
GKLQSSSDTRSCSSLASESSVLSLTSERPCPPPLGLGIVVDPSSPPSSPIYSNKVKVDTH
HRDTDLAKKVLNTTQSSPKILTHNRVLSDEASRITTTAVLQPCPAVESLKGQGMTFSQSS
LCINGSHIDGSEPVGPKGSGTLPSKLVLLEKCSPLSRSLQNLTKRSEDNGSAGEGRRWSF
DKVNKEEKYVEKEAEPHVSQVQSARVGGHSVLAAASMLSSTTTVDSADKRKKLRKSLFSG
GRSDSLPAKLAPSQGCPLTEGRLQGWFGSSDSQNKPRLEVSSKVESDSDTPPLPPCSPIP
TQCSSSSTGRASPDSGHPTNPFTPSLTPNPISPSNPFLPCLQCNPFFEDLKTEEARRSPP
RAACSPCHSTALPCIPSTAHDVAVQKKMAAIRRERPGPVARQTSLPALLPRAVTASPPNP
LTSRSISESGGRECDESFDAFASSRLNSPKGSPTNHPSNATLWQAQVRSTPPHKGNTISP
IEEMRMSEEEAEPPPLPPRRPITRPLVNKRSSDSWLHRGQELAVQKEACLLSQTVAASLQ
HTREGGQKRCTPSPHLYPSLGKDLLVSSDMSDFHTEHSQHYANISPESPSPFKSEDDFKK
FDYEPLRDEDDSCKFMFTEQDLWPGATENHLDLNVKDSIILLASEDTTDTSPTVREDGIV
KNTSHSEIKALSLPVMLLDSEMTVADLLYMSSPKHSKSGLKTLDIALITPDPTMELFSIH
PDKPTKSRNIHYESPPLTLEDLNKNLSNSDFSFIDSASDASPSPSEMITVHTLKSLGGIF
PQPPQVTHIVSSAHDIRLSAEDMLTFQKPSTIDVNSALKANLPEASLCQDNWQDGGCELT
PDSVNIESEDITRDTEDIKHTQSPLNSKGNISKSKIDSSIVDPSCHIRTSPVSPQIGMQQ
EVVRTKPVNESSPRGASSHRSLKEMIRELYGNGGANSPGKGLRESPLHQSLSPGHVLSES
IEVPFSYQPTKSIFSSPLSPDRETTFKADKLFVSLQKTNTNSSTQSITKENCLTERSPSK
HAGTISFKDLHAKVAPNIRSPMSARLRPGVSLHASSPSSVAPSLVTETNAQAKLLPTPGP
SSIHHPPTLRPSTGDNATLAMAPCTSSSFSSSSFTSSTTVQPLVDARQTLLPEETQPASS
LPRQESRPHPVKPLTTTASQGEKKEGRSVLEKLKSSIHPGLAAKQTLAEAETEIEESLTD
RSAQYEQLTKMELISLLLQQQMDMEDQQAASEQQAVLLKKHEAEMKKIKAQVRDLEDYID
RLLVQIMEQTPTLLQVRSRHK
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttatagatttaaatgatgaccagagatgggtgcctacacatgtgaatgtaact
gtccttcgtgcaaggggtttacggacaaagggcaagcacggaggtagccgttatgtttac
acaatcattcaggtggggaaggagaaatacaccaccggtttggtcgagaaggcgactgtg
ccagagtggaatgaggaatgctgttttgaacttctacccggaatactggaggatgggggt
cgcagtgtttttccctcagggagcggtgacttggtcctcaccattatgcaccgggtgctt
atcggacttgacgtgtttcttggtcaagcaatcctccctttggataaaatatttcaagat
ggaatgtgccctagagatgaatggctcaaactcaactccaaggccggccggaaggagaag
gagcgcggcgagatgcaggtgacggtccagttcacccgcaacaacctgacagccagcatg
ttcgacctaaccatgaaggacaagccacggtctgccttcggcaaacttaaggaccgcgtt
acggggaggaagatcggcgacatggagtcctcatcagccatcgtgccgggacgcttcgcc
gccctgtcgggttccctaggaaagccattccgagaaggggaccgaggggaagggggagag
gaccccgtggaggtagccgaggagaagcggagcaaggtgaaggatttcttcaaggggaag
ggaaagctgcagagttcgtccgacacaaggtcgtgctcgtcgctggcctcggagagcagc
gtgttgtccttgaccagtgagaggccctgcccccctcctctgggcctaggcatcgtggtg
gatccttccagtccccccagctctcccatctacagcaacaaggtcaaagttgacacccac
cacagagacacagacctagctaaaaaagtgctcaacaccacacagtcttccccaaagata
ctgactcacaatcgagtcctcagcgacgaggcaagtaggatcaccactactgccgttctc
cagccctgtcctgcagtggaatccctcaagggtcagggtatgactttctcccaatcctct
ctgtgcatcaacggaagccacatcgacggatccgaaccggtgggtcccaagggctcaggc
accctcccatccaagctggtcctccttgagaagtgctcccccctctctcgttcgctgcag
aacctcacaaagcggagcgaggacaatggttcagccggtgagggacggcgctggtccttc
gacaaggtgaataaggaagagaagtacgtggagaaggaggccgaaccgcatgtctcccag
gttcaaagcgcacgggtggggggtcattctgtgctggcagctgcctcaatgctgtcttcc
accaccacggtggactcagcagacaaaaggaaaaagctcagaaagtcgttattctccgga
gggaggagtgattctctacctgccaagttggcgccaagccagggttgtcctctcaccgag
gggagactgcaaggctggtttggctccagtgactcccagaacaagccaaggctggaagtt
tcttctaaggtagaaagcgactcagacacccctcccctccccccttgctcccccattccc
acccagtgctcttcttcttccactggccgtgcctcacccgacagtggccatcccactaac
cccttcaccccctctctgacacccaaccctatctctccctccaaccccttcctcccgtgt
ttgcagtgtaaccccttttttgaggacctcaaaaccgaagaggcccggaggtccccccct
cgcgctgcctgctccccctgtcattccacagctttgccttgtatccctagtaccgcccac
gatgtcgcagtgcaaaagaaaatggccgccatacggcgagagcggcccgggcctgtagcc
aggcagacatcccttcctgcattactcccgagagcggtgactgccagccccccgaatccg
ttgacctctcgctccatatcagagagcgggggaagagaatgcgatgagtcctttgacgcc
tttgcgtctagcaggctgaattcgccaaagggctctcctaccaatcacccttcaaatgca
accttgtggcaagctcaagtaagaagcactcctccacataagggtaacactatttcaccc
attgaggagatgcggatgagtgaagaagaagcagagcctccaccgttgcctccacggagg
cccataacaagacctttggtaaacaagagatcttctgacagctggttgcacaggggtcag
gagctggctgtgcagaaagaggcctgtctcctgtcacaaacggtcgcagcttccctgcag
cacacaagagaaggcgggcagaagagatgcacaccaagtccccacctgtacccaagctta
ggcaaagaccttctcgtcagcagtgacatgtcggactttcataccgaacactcacagcat
tatgccaatatttctccagagtctccatctccattcaagtctgaagatgacttcaagaag
tttgactatgaaccattgcgagatgaagatgatagctgtaaatttatgtttactgagcag
gacttatggccaggtgcaacagaaaaccatctagacctgaatgtaaaggattcgataata
ttgttagcctcagaggatacgacggacaccagtcccactgttagagaagacggcattgta
aagaatacttcacattcggaaatcaaagccttatctctaccagtaatgcttcttgatagt
gaaatgactgttgccgacctactgtatatgtcttccccaaaacactctaaatccggtctt
aagacgcttgacattgcgttaattacaccagacccaacaatggaattattctcaattcac
ccagataagcctaccaagtccagaaacatccattatgaatcgcctccactaaccttggaa
gatctaaataaaaatctaagtaactctgattttagttttattgactctgcttctgatgct
tccccatctccatctgaaatgattacagtgcataccctcaaaagtttaggtggcattttt
cctcaacctccacaagttactcacatagtctcttctgctcatgatatacggctatctgca
gaggatatgttaacttttcagaagcctagtactatagacgtcaactctgccctaaaagcg
aatttaccagaagcctcgctttgtcaagacaattggcaagatggaggttgtgaattgacg
cctgacagtgttaacattgagtctgaagacatcactagagacactgaagatataaaacac
acacagtctccactgaatagcaaaggcaacatttctaaatcaaagatagacagttcaata
gtcgacccttcatgtcacattagaacttctccagtttctccacagattggaatgcaacag
gaagttgtacgaaccaagcctgtcaatgagtcttcaccaaggggtgctagttcacacaga
agtctcaaggaaatgatacgagagctctacggcaacggtggtgcaaatagccctggcaaa
ggattgcgtgagagccctcttcaccaatcactgtctcctgggcatgtactctcagagagc
attgaagtacccttctcatatcaacccaccaaatcaattttttcctcacctttgtcacca
gatagagagacaacgttcaaggcagataaattatttgtttccttgcaaaaaacaaacacg
aatagttccactcagtcaattacaaaagaaaactgcttaacggaacgttccccatccaaa
catgccgggaccatcagcttcaaagacctccacgccaaagtagccccgaacatcagaagc
cccatgagtgccaggttaaggcctggtgtctctctgcatgcttccagtccctcctctgtg
gccccctccctggtgactgaaactaatgcccaggctaagctactccccacccccggcccc
tcctccatacatcaccccccaaccttgagacccagtaccggagacaatgccaccttggct
atggccccctgcacctcttcctccttctcctcctcctcctttacctcctccaccactgtc
cagcccctggtcgatgcacggcagacacttttacctgaggagacccagccagctagcagc
ctgccccgacaggagagcagaccccacccagtgaagcccttgaccaccacagccagtcag
ggggagaagaaagagggccggtcagttctagagaagctcaagtcttccatccacccaggc
ctcgccgccaagcagacactggctgaggctgagactgagattgaggaatcgttaacggac
aggtctgcccagtacgagcagctgaccaaaatggagctgatctcccttctactgcagcag
cagatggatatggaggaccagcaggcggcctcagaacagcaggcggtgctgcttaagaaa
cacgaggcggagatgaagaagatcaaggcacaggtgcgcgacctggaggactacatcgac
aggctgctggtgcagatcatggagcagacacccacactccttcaagtgcgctcccgacac
aagtga
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integrated database retrieval system
