Salvelinus fontinalis (brook trout): 129858263
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Entry
129858263 CDS
T11136
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129858263 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129858263 (neil3)
Enzymes [BR:
sfon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129858263 (neil3)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129858263 (neil3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
129858263
NCBI-ProteinID:
XP_055783362
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All DBs
Position
6:complement(62556792..62563694)
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AA seq
589 aa
AA seq
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MVEGPGCTLNGEKIRSKVQRGQKVKEFRGSLTTNTQRNATNTISFQIFMGCQYTGVETLG
KELFVYFGQRALRVHFGMDGSMRINPTDIKSRKGSPPVLEIHLTNDTVSFFDSTVEIRLT
EDCEQRVRAMESLDVCSSKFSFSHAEETVRRQSCRMLCDVLLDQAVLPGVGNIIKNEALF
DSGLHPSVKVGQATDTQLHHLVKMTRDFTLLFYKCRKTGSALNKHYKVYKRPQCGQCNGA
VTVCRLGDNGRMTYFCDRCQTGDPSEVNVSKLPTRNTLVGWAYQGSMGSNDHVAKREEEE
WACQLCTLINQPMSKACDACLTPRPELPKDNVSPESSPFTRDLIKYPCNAFSKPQEGLKV
NRRAAFGNTTLMFTDLSPKASRVNSPLPLSSTNSQLNSMARGLNKHNVCQGKRSSPSYAS
GGWQDKGGELSKGESTMVSYSQPHKKMRIDHSPFSVSNKPQNGTHHHLSPPQNNAPTGCT
QTQSPPSNPCCVSHGRPSVLRLVTKQGDNKGRQFYTCSLPRETQCKFFEWADTHFPFCNH
AKRCLVRTVLKLGPNNGRNFYVCSFPKGKQCDFFQWAENGPGISILPGC
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggttgagggtccaggatgcacattgaatggagaaaagatccgctcgaaggtccaaaga
ggacagaaggtgaaagaattcaggggaagcttgacgacaaacacacaaaggaatgccacc
aatacgatctccttccagatattcatgggctgtcaatacacaggagttgagacccttgga
aaggaactcttcgtgtactttggccaaagagctctgagagtccactttggtatggatggc
tctatgcgaatcaaccccactgacatcaaaagcagaaagggatcaccccctgtgctggag
atccacctgaccaatgacacagtctccttctttgactctactgtggaaatcagactgacg
gaggactgtgaacagagagtgagagctatggagagtctggatgtctgctccagtaagttc
agcttctcccacgcggaggagactgtgaggaggcagagctgcaggatgctgtgtgacgta
ctcctagaccaggccgtcctaccaggagtgggaaacatcattaagaacgaagccctgttt
gactccggtcttcacccttctgttaaagtgggtcaagcaacggatacccagctccaccat
cttgtgaaaatgacacgagatttcaccctcctattttacaagtgccgtaagacaggctcc
gctctcaacaaacactacaaagtctacaaacggcctcagtgtggtcagtgcaacggtgcc
gtcaccgtctgtcgcctcggagacaacggaaggatgacgtacttctgcgaccgctgccag
actggggacccaagtgaggttaatgtgagcaagctcccaaccaggaacacgttagttggc
tgggcttaccaaggcagcatggggagcaacgatcatgtggccaagagggaggaagaggag
tgggcctgtcaactctgcactctcatcaaccagcctatgagcaaagcctgtgatgcctgc
ctgacccctaggcctgagctccccaaagacaatgtcagcccagagagttcacccttcacc
agagatctgatcaagtacccctgcaatgccttctccaaaccacaagagggcctgaaagtc
aaccgcagggccgcattcgggaacaccaccctgatgttcaccgacctcagcccaaaggcg
agccgcgtcaactctccccttcccctatcctccaccaacagtcagttaaattccatggca
agaggtttaaataaacacaatgtctgccagggaaaaagaagtagtcccagttatgcctct
ggtggctggcaggacaaaggcggggagctctccaaaggggaatcaacaatggtctcctac
agtcagccgcacaagaaaatgagaattgatcacagtcccttttctgtcagtaacaaacct
caaaacggaacccaccatcatttgagcccccctcaaaacaatgcaccaactgggtgtaca
cagacccagtcccctcccagcaacccttgctgtgtgtcccatgggcggcccagtgtgctc
cgactggtcaccaagcagggggacaacaaagggagacagttctacacctgctcgctcccc
agggagacacagtgcaaattctttgagtgggctgatacacactttccattctgtaaccat
gcaaaacgctgcctggtgaggactgtactcaaactaggaccaaacaacggccgcaacttt
tacgtatgcagttttccaaagggcaagcagtgtgatttcttccagtgggcagaaaatggt
ccaggaatctccatccttcctggttgctga
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