Salvelinus fontinalis (brook trout): 129858272
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Entry
129858272 CDS
T11136
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129858272 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129858272 (pitx2)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129858272 (pitx2)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
129858272
NCBI-ProteinID:
XP_055783368
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Position
6:complement(62730183..62796276)
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AA seq
319 aa
AA seq
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MNSMKDPLNLDHHHHHHLTGTKLSSTHHTALAMASSLQPLQRSVDSKHRLEVHTVSDTSS
PESVEKDSKGQSKTDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI
AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYEDMYPSYTYNN
WAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSSVTGVPGSS
LNSLNNLNNLSNPSLNSGVPTPTCPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYTS
VQNPGSNLSACQYAVDRPV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgaaggatccattgaatttggaccatcatcaccaccaccacctaaccggg
actaaactctcctccacgcaccacacggcactagcaatggcctctagtctgcagccgttg
cagcggtctgtggactccaaacaccggttagaggtgcacacagtatcagacacctccagt
ccggagtccgtagagaaagactcaaagggccagagcaaaactgacgactcttcagatgat
ccttctaaaaagaagcgacagcggcgacagaggactcacttcacaagccagcagctacag
gaactggaggccacgttccagaggaatcgctatccggacatgtctacaagagaggagata
gccgtgtggaccaacctcacagaggcccgcgtcagggtgtggttcaagaaccggcgagca
aaatggaggaaaagggaaagaaaccagcaagccgagctatgcaagaacggcttcggtcct
cagttcaatggacttatgcagccctatgaagacatgtaccccagctacacatacaacaac
tgggccgccaaagggctaacttcggcctccttgtccaccaaaagcttcccttttttcaat
tccatgaacgtcaaccctttgtcatcgcagacgatgttctccccgcccaactccatctct
tcaatgagcatgacctccagtatggtgccgtcctcggttactggcgtgcccgggtcgagc
ctcaacagcctcaataatttaaacaaccttagcaacccctctctgaattcgggagttccc
acgccaacctgcccgtacgccccgccgacccctccttatgtgtacagggacacttgtaac
tccagtctggcaagcctgagactgaaagccaagcagcactcgagttttggatacaccagt
gttcagaatccaggctcaaatctgagcgcgtgccagtacgccgtggatagaccagtgtaa
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