Salvelinus fontinalis (brook trout): 129858295
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Entry
129858295 CDS
T11136
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
sfon04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129858295
04082 Neuroactive ligand signaling
129858295
04519 Cadherin signaling
129858295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129858295
Ion channels [BR:
sfon04040
]
Ligand-gated channels
GABA-A
129858295
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SAP130_C
Zip
Motif
Other DBs
NCBI-GeneID:
129858295
NCBI-ProteinID:
XP_055783410
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Position
6:complement(64388333..64403242)
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AA seq
561 aa
AA seq
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MVSAKKEMVTAMYPSYISTLFYLFCLTACVKRISGTIKKDERIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWMDRRLRYEGPIEILRLN
NMMVSNVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPQESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPAKCPP
APQTTPVKVKDMEEVLQHNPDTNGNADTNGNLRKRMNYMSQQDIQKAESNSEAATGVTRR
QPQPGQSSSSTGSTGDAIILPHSSPGPASQPNTSFTILSVKNTPPAPPTTPTIPANQSQP
TADSSLQDLLGPRLEHIQLMGKNEPKQSPCSQPTTSGMGGTSKIDKYARILFPVSFGAFN
MVYWVVYLSKDTMEAKFRGQI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccagttatatttcgactctc
ttctaccttttctgcctgactgcttgtgtaaagagaatctctggaacgataaaaaaggat
gagagaatatatcctgagaatttcacacgcattttagaccgactactggacgggtatgac
aacagactgcgacctggatttggtggtccagtgacagaggtgaaaacagacatttatgtg
acaagtttcgggcctgtctctgatgttgaaatggagtacaccatggacgtgttcttcaga
cagacatggatggacaggaggctgaggtatgaggggcctatcgagatcctccgcctcaac
aacatgatggtctccaatgtgtggactccagacaccttcttcaggaatggcaagaggtct
gtggcccacaacatgactgcccccaacaggctattccgcatcatgaagaacggcaccatt
ctttacaccatgaggttgactatcagtgcagagtgtcccatgaagctggttgacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atctatacctggaccaaaggaccacagtattcagtggaggttccccaagaatcctccagt
ctagtgcagtatgatctcattggccacactgtcagcagtgaagaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagcggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtatccttctggata
aataaggaatcagtcccggctcgaacagtcttcggcatcaccacagtcttgaccatgacc
acgttgagcatcagtgcgcgccactccctccccaaggtctcctacgccacagccatggac
tggtttattgccgtgtgtttcgcctttgtcttctccgccctcatcgagttcgctgccgtc
aactactttaccaacgcagagatggagagactgaaaaggaagccggcaaaatgcccaccg
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaacggtaacgcagacaccaacggtaaccttcgaaaacggatgaactacatgtcc
cagcaagacatccagaaagctgagtccaacagcgaagcagctacaggggtaaccaggaga
caaccccagcctggccaatcgtcttcatccacggggtcgactggggacgccatcatccta
ccacactccagccccggccctgccagccaaccgaacacctccttcaccatcctgtccgtc
aagaacacgcccccggctccacccaccaccccgacaataccagccaatcagagccagccc
accgctgactcctccctccaggacctcctaggacctagactggagcacattcaactgatg
ggtaaaaatgagcccaagcagtcgccatgctcccagccgaccaccagcggtatgggcggg
accagtaaaatcgataagtacgctcgcatcctgttcccagtgtccttcggagccttcaac
atggtctactgggtggtttacttgtccaaagacaccatggaggccaaatttcgaggccaa
atctag
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