Salvelinus fontinalis (brook trout): 129858394
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Entry
129858394 CDS
T11136
Name
(RefSeq) glutamate receptor 1-like isoform X1
KO
K05197
glutamate receptor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129858394
04082 Neuroactive ligand signaling
129858394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129858394
Ion channels [BR:
sfon04040
]
Ligand-gated channels
Glutamate (ionotropic)
129858394
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GRP
Motif
Other DBs
NCBI-GeneID:
129858394
NCBI-ProteinID:
XP_055783550
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Position
6:69873322..70059991
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AA seq
1008 aa
AA seq
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MTAEDKRASAARERKSGRREKTVTAVACSLSTLDGCCCKSICNWEKRSGEEEVYTNSPRK
DLCLDFGSFFFANAKGNMQRSFTLLYTSFLGMCLGSSFPSNINIGGLFPTESHEYEVFRF
ALSHHQDIPKLVPQVDMVKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGAL
HVCFVTPSFPIETANQFVIQLRPELQDTLVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDT
AAERSWLVTSVNVETMTEASFLKVFQDLDKRKEGQIIIDCETERLTSILKKIVEQGKNAK
SYHYILANLGFLDIDLTDLRKGGANITGFQLVNYTEQNVSRTIQQWMEFENKDAKFPKRR
LKYTGALTYDGVKVMSTAFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVR
IHGLTGHIQFNEKGRRTNFTVSVMELAPSGPKKVGYWNEDEKYVSTATFMRGSNDSSYGL
QNRTYIVTTILESPYVMLKKNHDQLSGNDKYEGYIVELAAEIAKHVGYHYKLKVVTDGKY
GARDSETKMWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKS
KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGADPQTPTQPTG
PGCAGLQSGQSPGQQGQNQQNQEQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGG
VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSK
IAVFEKMWSYMKSADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV
GGNLDSKGYGIATPKGSPLRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDK
TSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRTESQRMKQNINDAMHCSTRMSGNG
NGNGGGGGIGGAGGGENGRILTHDFPKTVQTLPCMSHNASMGLSASGM
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaggacaagcgggcatcagcagcgcgcgagagaaagagcgggaggagagag
aagacagtgactgcagttgcatgctctctctcgacgttggatggatgttgttgtaagagc
atctgcaactgggaaaaaaggagtggggaagaggaggtatacactaactcaccgaggaaa
gatctatgcttggatttcggctcttttttcttcgccaatgcaaaaggaaatatgcagcga
agcttcaccctcctgtacaccagttttctggggatgtgcttgggttcaagttttccaagt
aacatcaatatagggggactattcccaaccgaatctcacgaatatgaggtgtttcggttc
gcgctctcgcaccaccaggatatccccaaactggtgccgcaggtggatatggtcaagatg
ggcaacagcttctccatgacatatgccttctgttcccagttctctaaaggtgtctatgcc
atcattggcctctacgacaggaagacggtcaacatgctgatgtcgttctgcggggcgctg
cacgtgtgtttcgtcacgccttccttccccatcgagacggccaaccagtttgtgatccag
ctgagacccgagctacaggacactctggtgggggtcatagaccactacggatggaccaag
ttcgtctacatgtacagctcagattctggcctgtcggtcctgcagaaggtcctggacaca
gctgctgagaggagctggctggtgacgtctgtcaacgtggagaccatgacggaggcctca
ttcctcaaggtgttccaagacctggacaagaggaaggagggacagatcatcatcgactgt
gagaccgaaagactcacctcaatcctaaaaaagatcgttgaacaagggaagaatgctaag
agttaccactacatcctggccaacctgggttttctggacattgatctaacagacctgagg
aaaggcggggccaacatcacaggcttccagctggtcaactacacagagcagaacgtcagc
cgtaccattcagcagtggatggagttcgaaaacaaagacgccaagttccccaagagacgc
ctgaagtacaccggagcgttgacatatgatggggtgaaggtgatgtctacagcgttccag
aaccttcggaaacagaggatagacatctctcgccgtggcaacgcaggcgaatgcctcgcc
aacccaccggcaccctggggccaaggcatagatatacagagagccctgcaacaggtgcgt
atccatggcctgacaggtcacatccagttcaatgaaaaaggacgcaggaccaacttcacc
gtcagtgtcatggagctagccccctctggacctaagaaggtgggctactggaacgaggac
gagaagtacgtgagcacagccaccttcatgagaggaagcaacgacagcagctatggccta
cagaacaggacctacatagttaccaccatcctggaatccccatacgtgatgctgaagaag
aaccatgatcagctgtcagggaacgataagtacgagggttacatcgtggagctagcggct
gagatcgccaagcacgttggataccactataaactgaaggtggtcacagatgggaagtat
ggagccagagactccgagaccaagatgtggaacggcatggttggagagctggtgtacggg
aaagcagacgtggcggtagccccgctgaccatcaccctggtccgagaagaggtgatcgac
ttctccaagcccttcatgtctctgggcatctccatcatgatcaagaagcccaccaagtct
aaaccaggtgtcttctccttcctggacccgctggcctatgagatctggatgtgtatcgtg
tttgcctacatcggtgtgagcgtggtcctgttcctggtgagccgcttcagcccctatgag
tggcacgcagaggactatgaggagggggccgacccccagacccctacccagccgacgggg
cccggttgtgctgggctacagtcggggcagagccctggtcagcaaggccagaaccagcag
aatcaggaacagaccaacgagtttggcatcttcaactctctctggttctccctgggagcc
ttcatgcagcagggatgtgacatctcacccaggtctctgtcagggcggatagtgggtggc
gtgtggtggttcttcactctcatcatcatctcgtcctacacggccaacctagctgctttc
ctcacagtggagaggatggtgtcccccatagagagtgctgaggacctggctaaacagact
gagatcgcctacggaaccctggatgctggctccaccaaagagttcttcaggcggtctaag
atcgcggtgtttgagaagatgtggtcgtacatgaagtcggccgacccctcagtattcgtg
aagaccacagacgagggagtgatgagggtcaggaagtctaaagggaagtatgcctacctg
ttagagtccaccatgaacgagtacatcgagcagaggaaaccctgtgacaccatgaaggtc
ggggggaacctggactctaaaggatatggtatcgccacgcccaagggctcacccctcaga
aaccctgttaacctggccgtgttaaaactgaacgagcaaggcctgttggacaaactgaaa
aacaaatggtggtacgacaagggcgagtgtggcagcgggggcggggactccaaggataag
acgagtgcgttgagcctgagcaacgttgccggagtgttctacattctgattggaggactg
ggcctggccatgctggtggcgttggtggagttctgctacaagtcccgaaccgagtctcag
agaatgaagcagaacatcaacgacgccatgcactgctccaccagaatgagtgggaacggg
aacgggaacgggggaggaggaggaataggaggagcaggaggaggagagaacggacgcatc
ctaactcacgacttccctaaaacagtccagactctcccctgcatgagccacaacgccagc
atggggctcagcgcctccggcatgtaa
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