Salvelinus fontinalis (brook trout): 129858399
Help
Entry
129858399 CDS
T11136
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04810
Regulation of actin cytoskeleton
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129858399
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129858399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129858399
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129858399
Factors involved in mRNA localization
Other mRNA localization factors
129858399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
129858399
NCBI-ProteinID:
XP_055783562
LinkDB
All DBs
Position
6:70177317..70224850
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaatgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccaccttcatccatcatgtaccaggct
aacttcgacacaaactttgaggacaggaatgcgtttgtgacggggatagctcgctatata
gagcaggctactgtccactctagcatgaatgagatgctggaggagggccatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaacgag
cagcccaacagggtagagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtacttccagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctgtgccacgctgagcggaggaaagactttgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgcagc
gtcaagaacgaccactctgcctataaaagggcagctcagttcctgaggaagatggccgac
cctcagtccatccaggagtcacagaacctctccatgttcctagccaatcacaacagaatc
actcagtgtctgcagcagcagctggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacttgacgcccagcgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggatggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaagttcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagacc
agcgctcactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgagacgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggcctggacagtcagaaa
tcagacgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagttggtccacccgacagataag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgcactggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcaatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtc
cgaaccatgctggagtcgttgatagccgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagttgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagaccctgctcaaacagagacacgtacagcttctgggtcgctccatc
gatctgaaccgtctgatcacccagaggatctccgcagccatgtacaagtctctggaccag
gccatcagccgctttgagagtgaagacctcacctccatagtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctttcgaagcacatgaccctggacagcttcgac
gccatgttccgtgaggccaaccacaatgtgtctgccccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgttacaacggctccaccaac
cgcttcgtgcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcccacatctat
agctcctacaggaacttcgtaggcccgccccacttcaaaaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaagaactgctcaagatagtcaaaagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaggtaatgcccaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacagatgtcttccagagtctcagagaggtggggaat
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaagtgtgtgacctg
cttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctcctctccatctggtgcccctc
atcgagaggctggggacgcctcagcaaatagctatagcccgtgagggggatctgttgacc
aaagagcgtctttgctgtggcctgtccatgttcgaggtgatccttacgaggatccgtagt
ttcctgcaggacgccgtgtggcgaggcccgccgcccaccaacggcgtgatgcacgtggat
gagtgtatggagttccaccgcctctggagcgccatgcagtttgtttactgcatacccgtc
ggcactcacgagttcactgcagagcagtgttttggtgacgggctgaactgggcaggctgt
tccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacggcaaggatgagatcatcaagaacgtgccgctgaag
aagatggctgatcggatcaggaagtaccagatcctgaacaatgagatctttgccatcctt
aacaagtacatgaaggctgtggagacggatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacatgctga
DBGET
integrated database retrieval system
