KEGG   Salvelinus fontinalis (brook trout): 129858486
Entry
129858486         CDS       T11136                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03010  Ribosome
sfon04120  Ubiquitin mediated proteolysis
sfon04137  Mitophagy - animal
sfon04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    129858486
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129858486
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129858486
   04137 Mitophagy - animal
    129858486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sfon03011]
    129858486
   04121 Ubiquitin system [BR:sfon04121]
    129858486
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfon04147]
    129858486
Ribosome [BR:sfon03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    129858486
  Archaea
    129858486
Ubiquitin system [BR:sfon04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   129858486
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129858486
  Exosomal proteins of colorectal cancer cells
   129858486
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N IBR TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 129858486
NCBI-ProteinID: XP_055783730
LinkDB
Position
1:complement(58478069..58482092)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagacaataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactgcgtgggggtgccaagaaaagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggcgctggtgtgttcatggccagccacttcgataggcactac
tgtggcaagtgctgcctcacttactgcttcaacaagcctgaggacaagtaa

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