Salvelinus fontinalis (brook trout): 129858496
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Entry
129858496 CDS
T11136
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129858496
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129858496
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
129858496
NCBI-ProteinID:
XP_055783743
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Position
6:78013785..78030757
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AA seq
1195 aa
AA seq
DB search
MSQKIPSDSSQKGFAVGRGLLAAAETLNFSMNEQRSDSLHHGSTSRQLHSMSTGMGGGEG
DHDPQLSRRGGNHIGNSMKLFASLGLSPADLDVLAQIPEENISVESLPQLIMQLKNRKVD
SDRRMAGNSRGDLSGLSSEPSYRANRDNWDDMRVGRLGGSMGQASAHAQQGDLGYNSIQD
TPAGRYELDYGHGSGGRDPAWYSDLSHDRYSGMGTGPPSAADSVFMTRRMSSPSQGKVQD
FLGVIPHMFPHVCSLCDFDVHSTMEWNQHTDGLRHAENQRLLLQMYPEWDPHMATSRGGG
SHLLETNQSAGLLGPIPMGGGQQAGGGRMTSGWGGGAGSNIGSGKPHQHFIAPKQIRSKV
VVAKYDRCPLSNKALFALAEPFGTLCEHLVLKNKAFLEMETHKEARDVVSYYQQNPAVLN
GKQITLYLSKELMVIQKDRRTERINREAKLGKEPAPATQSQVVFFSNLPREDEKKQELLT
IARRFGTVQKHLFLTAESSSSKAFVQLGSAEDAEMLVKYYTLNPLTIQGQSVRLNICTKY
KTLNVNNRSNKLMDDKRRRSTGPKDKSSSSKSTKSSSSSSSKAKEDTKEPPKGEDGGAGR
EGEGSGREGKEGVGSGDVVAGVMEGDKAEEYEGEGEQGSHDVGPSADNAEAVTEDPETAA
NTSLESQEQKELAPDSDDVPSTAKVLSSSDVTEKAEGSEVEDGTVPGPEEKAEGETESEQ
IETEATTDAPETEDKDDSPSAEPAEGSEMHEEQLPADQEEGSMEQDFPENMDDFVTLDEL
AEDEDLERQDSSSKEKYSSSGSSKKIGGLRVVNVVGFKRAYGFMNEILALAKPFGTVVQH
LVLDVRPEAFLQLTSEEEAKTMVNFYSGNVTPTVCGKSVKIYHSQTYATIQSGRVVYVGQ
IPHFKSSDASLLKIAEPFGKVRRYFLNRSRNECFIEMERGEDAERMAETYKDTPPKLEGK
RLTVYVSRKYKQLKYGHRPPGPDSEEKKRPSKRERSGSETSSHRSSAAKSSAKQDEEPPV
KKSREETAASSADEPDKEDKEEMEAHTEQSEVEVRKQEEEEEVQGEYGQPSGNSAVHEID
TDMNIKMEENEAPISIVSVRSVDENGETASTPSQAEGKLSSTSPVPLGPYEPNNPVGVEY
VKMGYYCRVCFLFYSNEETAKKVHCSSQSHYQKLKKHLEKEKAKAQSSTGMKTPV
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagattccatctgatagctctcagaaaggctttgctgtgggacgcgggctc
ctggctgctgctgagaccctcaacttcagcatgaatgaacagcgttcagacagccttcat
catggctcaacctccagacagttgcacagcatgtccacaggtatgggtggtggtgagggc
gaccatgacccgcagctgtcccgtcgtggtggcaaccacattggcaactccatgaagctg
tttgccagcttgggcctgtcgcccgctgacctagacgtgctggcacagatcccagaagaa
aacattagtgtggagtccttgcctcaacttattatgcagcttaagaaccggaaggtggat
tctgacagacgcatggcaggcaactctagaggggacctgtctgggctctcctctgagccc
tcatacagagccaacagagacaactgggatgacatgcgtgttggaagactgggtggttcc
atggggcaagcttcggcccacgctcagcaaggagacttgggctacaattccatccaagac
actccagctggaaggtatgaactcgactatggccacggcagtggtggaagagatccagcg
tggtattcagatctttcacatgatcgctacagcggtatgggcacgggtcccccctcagcg
gcagacagtgtctttatgaccaggagaatgagttccccgtcccaaggcaaagtgcaggac
ttcttaggagttatacctcacatgtttccccatgtgtgctctctttgtgattttgacgtg
cattctaccatggagtggaaccagcacacggatggattacgccatgcagaaaaccagagg
cttctcctgcaaatgtacccagaatgggatccacacatggccacaagcagaggcggtggg
tctcatctactggagacaaatcaatcagccggtctcctgggaccaatccccatgggcggt
gggcagcaggctggaggaggccgcatgacctccggctggggtggtggtgctggatctaac
attggatcaggcaagccacatcaacactttattgcacctaagcagatcagaagcaaagta
gtggtggccaaatatgacaggtgtcctctgtctaacaaagccctgtttgccctggctgaa
ccctttggaactctctgtgaacacctggtactgaagaacaaggcctttttagaaatggag
actcataaggaagctagggatgtggtgagctactaccagcagaacccagcggtgttgaat
gggaaacaaatcactttatatctgtccaaagaactcatggtgattcagaaagaccgcaga
actgagagaatcaaccgagaggcgaaactaggcaaagagccagcgccagcgacccaatcg
caggtagtcttcttctccaacttgccgcgtgaggatgagaagaagcaggaactcctcacc
atcgcgcggcgcttcggcaccgtgcagaaacacttgtttctaactgcagagtcttcgtct
tccaaggcttttgttcagctggggtctgcagaggatgctgagatgttggtgaagtactac
actctgaatccactgaccatccagggacagagtgtccgcttaaacatctgtaccaagtac
aagaccttaaatgtgaataatcgctccaacaaactgatggatgacaagagaaggagaagt
actgggcccaaagacaaatcttcctcctccaagagcaccaaatcttcctcttcttctagc
agcaaagccaaagaagacacgaaggaaccaccaaaaggagaggacggcggtgcagggaga
gagggagaggggtcagggagggagggaaaggagggagtggggtcaggggacgtggtggct
ggtgtgatggagggagataaagctgaggagtacgaaggagagggagagcagggttcacat
gatgttgggccgtcagcggacaatgctgaagccgtgacggaagacccagagactgctgcc
aacaccagtctggaatcgcaggagcagaaggaacttgctccggactcagatgacgttccg
agcactgccaaggttctgagcagtagtgatgtcacagagaaggctgaggggtcagaggtg
gaggacgggacagtgcctggtccagaggagaaagcagagggagagactgagagtgaacag
atagaaactgaagccactacagatgcgccagagaccgaggacaaggatgactcgccgtcg
gcagagccagcagagggctcagagatgcatgaagaacagttacccgcagatcaggaagag
ggcagcatggagcaggatttcccagagaacatggatgactttgtgactctggatgagctg
gcagaggacgaggacttggagagacaggactcctcatccaaagaaaaatactcatcttca
ggaagctctaagaaaattggtggattgagagtggtcaacgttgtggggtttaaacgggcc
tatggttttatgaatgagatcttggccctggccaaacccttcggtacagtagttcagcac
ctggtgcttgacgtgagacctgaggcctttctgcaactcacttcggaagaagaggcaaaa
acaatggtcaatttctacagtgggaatgtaacaccaactgtgtgtgggaaatctgtgaaa
atctaccattcacagacatacgctaccattcagagtgggagagtggtatacgtgggacag
attccacacttcaaatcctccgatgcctccctcctgaaaatcgctgagccgttcggcaaa
gtgagacgctatttcctgaacagatctcgcaacgagtgtttcattgagatggaacgtgga
gaggacgctgagagaatggctgaaacctacaaggacacgccccctaaattggaaggcaag
cggctaacggtgtacgtgagcaggaagtacaaacaactcaaatacggacaccgaccacca
ggccctgactctgaggagaagaagaggccgtcgaagagggagcgatcaggcagtgaaacg
agctcccaccggagctcagcagccaaaagctcagccaaacaggatgaagaacctccagtc
aagaagtccagagaggagacggcggcatcctcggcagacgagcctgacaaagaagacaag
gaggagatggaggcgcacactgagcagagtgaggtagaggttaggaagcaggaggaggag
gaggaggtccagggggaatacggtcaaccctctgggaactcagctgtacacgaaatagac
actgacatgaacatcaaaatggaggaaaacgaagcgcccatttccatagtgagtgtgagg
agcgttgacgagaatggagagactgctagcacaccatcccaggctgaggggaagctttca
tcaaccagcccggttcctctggggccgtatgagcctaacaacccagtgggtgttgagtat
gtgaagatggggtactactgcagagtctgtttcctgttctattccaatgaggagacagcc
aagaaggttcactgcagcagtcaatctcactaccaaaaactcaagaaacatctggaaaaa
gagaaggccaaagctcaaagtagcacagggatgaagactcctgtgtag
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integrated database retrieval system
