Salvelinus fontinalis (brook trout): 129858531
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Entry
129858531 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129858531
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129858531
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129858531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129858531
NCBI-ProteinID:
XP_055783809
LinkDB
All DBs
Position
6:complement(81412190..81422355)
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AA seq
910 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEVLLSRLQQIKDGPEQQQPSINTSETGEATGEPTEPVEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARADVGEGEAQEEAPAE
APGDGVEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGV
EVQAGTEAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAGTEAVVGVEVQA
GTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAGTEAGTEA
GTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEVPMETGEVL
EEPVVEDLAVIVEPEVEMEPEAELEAEMVPELVVEVVPQPPSPVTTTPPVSRPASPLVQA
PPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPLTLDRLDGLPRHVPNAAPSHSPP
TLPPQVPAEGSSRTRQHVLSRQSTSEYEVQSAGTGSDTGSGNAPEPVTTPPQEGEAAGGE
GAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSR
SERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDS
NRGGGNPTGAADLAEALNTPEGGVAGMAEGAEPPVSVGGPSVGGAGEARTEEGEEGVGVG
LAPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQID
NLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV
LVSANRESVV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaatctgctgggtaccccaggtgagatcaca
gcggaggtgttgttgagtcggctgcagcagattaaggatgggccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaaccgacagaaccggtggaaggt
ccagaggacccgtctaatggcgacaccctcttggattggctgaacaccgtcaggcggaca
ggcaacaccacccgcagtggtcaccgaggcaaccagtcgtggcgggcggtgagccggacc
aacccaaacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggct
gagcagcaggcccgcgccgatgtgggggagggggaggctcaggaggaagcccccgcagaa
gcacctggcgatggggtggaggcagtggtcggagtggaggtccaggcagggactgaggca
gtggtcggagtggaggtccaggcagggactgaggcagtggtcggagtggaggtccaggca
gggactgaggcagtggtcggagtggaggtccaggcagggactgaggcagtggtcggagtg
gaggtccaggcagggactgaggcagggactgaggcagtggtcggagtggaggtccaggca
gggactgaggcagtggtcggagtggaggtccaggcagggaccgaggcagtggtcggagtg
gaggtccaggcagggactgaggcagggactgaggcagtggtcggagtggaggtccaggca
gggactgaggcagtggtcggagtggaggtccaggcagggaccgaggcagtggtcggagtg
gaggtccaggcagggaccgaggcagtggtcggagtggaggtccaggcagggactgaggca
gtggtcggagtggaggtccaggcagggactgaggcagggactgaggcagggactgaggca
gggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggca
gggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggca
gggactgaggcagggactgaggcagggacggaggtacccatggagacaggagaggtgctg
gaggaacccgttgtggaggatctggctgtcatagtggaaccagaagtggagatggagcca
gaggctgaactagaagcagagatggtcccagagttagtagtagaggtagtcccacagccg
cctagccctgtcaccaccacccctcctgtctccagaccagccagtcccctggtgcaggcc
cctcccagccctccccctgaggagcctccgcgacgtggccagagacgagcccgcagccgt
agccccgagcagcgccggacaagggctcgcaccacacggagccgttctcccctcaccctg
gaccgactggacggcctcccccgccacgtgcccaacgccgccccttcacacagccccccc
accctgcccccccaggtccccgcagagggaagctcacggactcgacagcatgttctgtcc
cggcagagcacctcagagtacgaggtccagtcagccggaacagggtctgacacaggttct
ggaaacgccccagagcccgttaccaccccaccccaggagggagaggccgcgggcggggag
ggagcagcgggacgacgtccccccaccatcatgctggacctgcaggtgcgtcgtgttcgt
ccaggtgagtaccgccagagggacagcattgctaacagaacccgctcacgctcccagaac
tccaacaacaccttcctgtacgagagtgagagggggggattccgcaggaccttctcccgg
tccgagcgcgcgggtgtgaggacgtacgtcagcaccatcaggatccccatcaggaggatc
agtgacgcggggttgggagaggccacctccatggctctgcagaccatgatacgacagatc
atgaccggcttcggagagctcagctacttcatggactcggactcggactcctcggactca
aaccgtggcggtggtaaccccactggcgctgccgacctggccgaggcgctcaacactccc
gaggggggagtagccggtatggcggagggggcggagcctcctgtctcagtgggtgggcct
agtgtgggaggagccggggaggcaaggacagaggagggggaagaaggggttggtgtaggt
ctggccccagggataggtttaggggtggggggcacccccagggaggggcgagctcggccc
cgtgcccccatcagtttggaggaaccagggtcactacccttcctccgccttgctcacttc
ttcctcctgaatgatgaggacgaggaacagcccagaggactcaccaaggagcagatcgac
aacctctccaccaggaactttggggagagtgacgctctgaagacctgcagtgtgtgtatc
acagagtatgctgaggggaacaagttgaggaagttgccctgttctcatgagtaccatgtt
cactgtatcgaccgctggctgtctgagaactccacctgtcctatctgccgcagggccgtg
ctggtgtctgctaaccgggagagtgtggtctaa
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