Salvelinus fontinalis (brook trout): 129858541
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Entry
129858541 CDS
T11136
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129858541
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129858541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129858541
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129858541
Intermediate filaments
Intermediate filament-binding proteins
129858541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
PH_11
Motif
Other DBs
NCBI-GeneID:
129858541
NCBI-ProteinID:
XP_055783828
LinkDB
All DBs
Position
1:complement(58665148..58788281)
Genome browser
AA seq
2360 aa
AA seq
DB search
MELQRATSMPGPLSPGPIFPGSHSPGPLSPSSGPGPSLASSPGPDPGYSAKQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
IRVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLID
FDKLKKSNAHHNLQNAFNLAEQHLGLHKLLDVEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRRFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPRDGKLISDINKAWERLEK
SEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARR
IRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQA
DRVKAVNNNAQKFAIDAEGYKPCDPQVIRDRVAHMEFCYAELSQLAAERCARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDCGKDLTGTVRLLSQHRAFEDEMIGRAGHLQQTIKQG
EELVAADHFGADKIRERIQDIQEQWAALERLSAVRKARLEEACNLHQFQADADDIDAWML
DVLRIVSSADVGHDEFSTQALVKKHKDVAEEIAGYRPVIDALHEQSKTLPGEQTGSEEVQ
RRLSGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKL
EDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFR
DLVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGM
ERDLTAIEDKLGELGKEGERLAAEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEA
SKLQQFLRELDDFQSWLSKTQTAIASEDMPNTLTDAEKLLAQHEGIKNEIRNYEVDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEGAIKKQEDFMTTMDANEEKINAVVDTGRRLVSDKNI
NADRIQEKVDSIDERHKKNRLAASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETEAMVKEKLAALHKM
WDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKK
QQMLESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLNPLKKRKGNL
MASREIHQFNRDVEDEILWVEERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRC
DDIFERSQQVLKDDDNSPSGEGIRQRLVDLRRLWAQILEETAKRHGRLEEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLTA
AGHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHADAATIAEWK
DGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRMLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEAC
DGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVH
QFGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLT
TMELLEVRRQQEEEERRRNPPPAEFQTDTASPQQKEAEQVSLNGLPSDQDSPRDNGEGSD
IVNGVAEPSPGGSPSAERKGKPSQAATLPAKSLDSTPANQMEGLLHRKHEWEGHNKKASS
RSWHNVYCVINNWEMGFYKDIKSASQGIPYHNEIPISLKDAACEIALDYKKKKHVFKLKA
TDGNEYLFQAKDDEEMNSWMQAISSAASSDKTEMTPSSHSTPTSSRAQTLPASVALATES
SPGKREKDKEKRFSLFSKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagcatgcctggccccttgtccccagggcctatttttcca
gggtcccactccccagggcccctgtccccttcctctgggcccggcccctctcttgcctcc
agccccggccctgatccgggctactctgctaaacaggctgccttcaactacaaccaactc
gaaggccgttttaagcagctgcaagatgagcgtgaagcggtgcagaagaagaccttcacc
aagtgggtcaactcccacctagccagagtgtcctgcaggatcactgacctctatatggac
ctgagagatggacgcatgctcatcaaactactggaggttctctctggggagaaactgccc
aagcccactaaggggcgcatgcgtatccattgcctggagaacgtggacaaggccctgcag
ttcctcaaggagcagagggtccatctagaaaacatgggctcccatgacatcgtcgacggc
aaccaccgcctcacccttggcctcatctggaccatcatcctccgcttccagatccaggac
atcagagtggagacggaggataacaaggagaagaagtcggctaaagatgctctgctgctc
tggtgccagatgaagaccgcaggatatcccaacgtaaacattcacaacttcagcaccagc
tggagggatggcatggctttcaacgccatcctccacaaacacagacctgacctgatagac
tttgacaagctgaaaaagtcaaatgcccaccacaacctgcagaatgccttcaacctggca
gagcaacacctgggcctccacaagctactggacgtagaggatatcagcgtggaccaccct
gatgagaagtccatcatcacctatgttgtgacctactaccactacttctccaagatgaag
gccctgaaggtggagggcaaacggattgggaaggtgctggacaatgccattgagaccgat
aacatgattcagaaatatgagagtctggcctctgacctcctggaatggattgaacagacc
atcatcatcctcaacaaccgcaggtttgccaactccctagtgggggtgcagcaacagctc
caggccttcaacacctaccgtaccgtcgagaagccgcccaagttcactgagaaaggcaac
ctggaggttctcctcttcaccatccagagcaagatgagggccaacaatcagaaggtctac
atcccgcgggatggaaaactcatctcagacatcaacaaggcctgggagaggctggagaag
tcagagcatgagagggagctggcgctaaggacggagctgattcgtcaggagaaactggag
cagctggcccgccgctttgaccgcaaagccgccatgagagagacctggctgagtgagaac
caacggctcgtctcacaggacaactttggcttcgatctgcaggcggtggaggccgccacc
aagaagcacgaggccatcgagacggacatcggcgcctatgaggagcgtgtgcaggcagtg
ctctccgtggccaaggagctggaggcagagaactaccatgacatcaagcgcgtgacagcg
aggaaggacaacgtgctgcgtctgtgggagtacctgttggagctgctgaaggcccggcgc
atccggctggagatgaacctgggcctgcagagggtcttccaggagatgctttatatcatg
gactggatggatgagatgaagatgctgctgctgtctcaggactatgggaaacacctgctg
ggagtggaggacctgctgcagaagcacactctggtggaggctgatattgccatccaggcc
gaccgcgtcaaagccgtcaacaacaacgctcagaagttcgccattgatgcagagggctac
aagccctgtgacccccaggtgatccgggaccgtgtggcccacatggagttctgttacgca
gagctgagccagctggccgccgagcgctgcgcccgcctggaggagtcccgccgcctctgg
aagttcttctgggagatggccgaggaggagggctggatccgtgagaaagagcagatcctg
tcctcggaggactgcggtaaggatctgacggggaccgtgcgtctgctgagccagcaccgc
gccttcgaggatgagatgattggccgcgccggccacctgcaacagaccatcaaacaggga
gaggagctggtggccgccgaccacttcggagccgacaagatccgtgagcgcatccaagac
atccaggagcagtgggcggccttggagaggctatctgccgttaggaaggcccggctggag
gaggcctgcaacctgcaccagttccaagctgacgccgacgacatcgatgcctggatgctg
gatgttctccgcattgtgtccagtgccgacgtgggccacgacgagttctccacccaggcc
ctggtcaagaagcacaaggatgtggccgaggagatcgccggctaccgacctgtcatcgac
gccctgcacgagcagtccaaaaccctgcccggggaacagactggctcagaggaggtgcag
aggcgcctgtcaggtatcgaggagcgctataaggaggtggctgagctgacccggctgagg
aagcaggccctacaggatgccctggccctctacaagatgttcagcgaggcggacgcctgt
gaggtgtggatcgatgagaaggagcagtggctcaacagtatggagataccagagaaactg
gaggatctggaagtggttcagcacaggtttgaaagtctggagccagagatgaacaaccaa
gcctcccgcgttgctgtggtgaaccagattgctaggcaactcatccacagtggtcacccc
agtgaaaaggagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgt
gacctagttgacctgaagaaagactccctcaactcagctctgggtgtacagaactaccac
ctggagtgtaacgagaccaagtcgtggatccgcgagaagaccaaggtgatcgagtccacc
caggagctgggcaatgacctggccggggtcatggccctgcagcgcaaactcaccggcatg
gagcgtgacctgactgccatcgaggacaagctaggagaactggggaaggagggggagcgc
cttgcagccgagcaccctgaccaggcccagggcatcatgggtcgtctgggggagatcaca
ggagtgtgggacgagatgaagggcaccctgaagaaccgtgaggagtccctgggtgaggca
agcaagctgcagcagttcctccgggagctggatgacttccagtcatggctgtccaagaca
cagacggccattgcttcagaagacatgcccaacacactgacggatgccgaaaagctgctg
gcgcagcacgagggcatcaagaacgagatccgaaactatgaagtggactaccagaagatg
agggacatgggggaaatggtgacccagggccagacggacgcccagtacatgttcctaagg
cagaggctgcaggccctggacacaggctggaacgagctgcacaagatgtgggagaaccgt
cagaacctgctgtcccagtcccatgcccaccagctgttcctcagggataccaagcaggct
gaagccttcctcaacaaccaggagtacgtgctggcccatactgagatgcccacgactctg
gagggggcagagggagccattaagaagcaggaggacttcatgaccaccatggacgccaac
gaggagaagatcaatgctgtggtggacaccggacgcaggctggtcagtgacaaaaacatc
aacgctgaccgcatccaggagaaagtggactctatcgatgagagacataagaagaaccgc
ttggcggccagtgagcttctctgtaagctgaaggataacagagacctacagaagttcctt
caggactgccaagagctgtccctgtggatcaatgagaagatgctcacggctcaggacatg
tcgtacgacgaagccaggaacctccacagcaaatggctcaaacaccaggccttcatggcc
gagctgcagtccaacaaggagtggctggacaagatcgagaaggacgggatgcagctgata
gctgagaagccggagaccgaggccatggtgaaggaaaagctggcagcactccataagatg
tgggatgaccttgagtccaccacccagactaaggccaagtgtctgtttgacgccaacaag
gccgagctgttcacccagagctgtgccgacctggacaagtggctggtgggagtggatgga
caaatccaatcagacgactacggcaaagatctgaccagcgtcaacatcctgctcaagaaa
caacagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagc
caggcccaggtcctcagccaggaggggaaggacacagatgaggtggacggccagcgccgc
atcgtggagaagaagttccagcagctgctaaacccactgaagaagaggaagggaaacctc
atggcctcccgcgagatccaccagttcaacagagacgtagaggacgagatcctctgggtt
gaagagagaatgccactggcaacatctacagaccacggaaacaacctgcaaacagtccag
ttactcatcaagaagaaccagaccctgcaaaaggagatccagggccaccagccgcgctgt
gatgacatctttgagcggagtcagcaggtgctgaaggatgacgacaacagccccagcggc
gaggggatccgccagcggctggtcgacctgcggcgcctgtgggcccagatcctggaggag
acggccaaacgccatggacgcctggaggaggcccacaaggcccagcagtactactttgat
gctgccgaggctgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaaa
gccaaggatgagcagagctccgtggccatgctgaagaagcaccagatcctggagcaggct
gtggaagactatgctgagactgtccaccagctctccaagaccagcaggggcctgacggcc
gccggacacccagaaagtgaacggatcggcatgcgtcagtcccaggtggataagctgtac
gcggggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctt
tttcagctcaacagggaggtggatgacctggagcagtggatcgctgaaagggaggtggtg
gctgggtcacatgagctgggacaggactatgaacatgtcacgatgcttcaggagcgtttc
cgtgagtttgctcgcgacacgggcaacattggtcaagagcgtgtggacactgtcaaccag
ctggcggacgagctcatcaactcgggccacgccgacgcggctaccatcgccgagtggaag
gacgggctgaatgaggcgtgggctgacctgctggagctgattgacacacgcacgcagatc
ctggcggcgtccttcgagctgcacaagttctaccatgacgccaaggagatcctcaaccgc
atcctggacaaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggag
accctgcagaggatgcacaccacctttgaacacgacatccaagccttggggacacaggtg
aggatgttgcaggaggatgctgtgcgcctgcagtctgcctatgccggagacaaggctgat
gacatccaaaagagagagggtgaggttttggaggcctggagaacactgctggaggcctgt
gacggccgcagggtcagactgctcgacaccggcgacaagttccgtttcttcagcatggtc
cgagacctcatgctctggatggaggacgtcatccgcctaatcgaggctcaggagaagccc
agggacgtgtcatctgtggagctcctgatgaacaaccaccagggcatcaaggctgagatc
gacgcccgtaacgacagctttaccaactgcatcgagctgggcaagtccctgttggcacgg
aaacactacgcattagaggagatcaaagagaagttactacagttgacggacaagaggaaa
gacatgattgacaagtgggaggacagatgggagtggcttagattggttctggaggtgcac
cagtttggaagggacgcgggtgtggccgagtcgtggctgctgggacaggagccgtacctg
tccagcagggagatgggtcagaatgtggatgaagtggagaaactcatcaagagacacgag
gcctttgagaagtcagctgccacctgggaagagcggttctctgcgctggaacggctgact
acgatggagttactggaagtgagaagacagcaagaggaggaggagaggaggagaaatccc
ccacctgcagagttccagacggacactgcatcgccacagcagaaggaggctgagcaggtg
tctctgaatggactgccatcggaccaggactcccctcgggacaatggggagggaagtgac
attgtaaatggggtggcggagcccagcccaggcgggtcgcccagtgcagaacgcaagggc
aagcccagccaggctgccacgctcccggccaagtccctggactcaaccccagccaaccag
atggaaggcctcctgcaccgcaaacatgagtgggagggtcacaacaagaaggcatccagc
agatcctggcacaatgtgtattgtgtgatcaacaactgggaaatgggcttctacaaagac
attaagagtgccagccagggaatcccctatcacaacgagatccccatcagcctgaaggat
gctgcgtgtgagatcgccctcgattacaagaagaagaagcatgtgttcaaactgaaagct
acagatgggaatgagtatctcttccaagccaaagatgacgaggagatgaactcgtggatg
caggccatctccagtgctgcgtcctctgataagaccgagatgacccccagcagccatagc
acccccacctccagccgagcccagaccttgcccgcctctgttgccctggcaaccgaatcc
agcccaggcaagcgcgagaaagacaaagaaaaacgcttcagccttttcagcaaaaagaag
tag
DBGET
integrated database retrieval system
