Salvelinus fontinalis (brook trout): 129858558
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Entry
129858558 CDS
T11136
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129858558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129858558
03036 Chromosome and associated proteins [BR:
sfon03036
]
129858558
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129858558
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129858558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129858558
NCBI-ProteinID:
XP_055783856
LinkDB
All DBs
Position
6:84610684..84763801
Genome browser
AA seq
2513 aa
AA seq
DB search
MEEEEEEEAGSSTETERPSSSHTKRKPAAAAKQVGGNESDTSDESGQEDGASDGMLVVQP
PAGTDNKEDKSRGAMKLRVDLSRRKTGKMSKASAESTDQVMEEEVGPPPITDQMEEEEEA
GSSTETERPSSSHTKRKPAAAAKQVGGNESDTSDESGQEDGASDGMLVVQPPAGTDNKED
KSRGAMKLRVDLSRRKTDTTLQERIDCTACGQQVNHFQRHSVFEHPMLHVLLCKSCYKYY
TSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSMITDDDSKWS
CYICSPQPLSDIASNCSNIMTKLESFWRTGRKKEREVKGHSKGKGHHHHGKAVVNGKEHS
DGSGTLTFSYKTLKVPKELVKRTKKLIETTTGLNNTFIHFIQQAEEEQGAGGGGSGTRHR
HLKAFRSVLADLKKAHAALEKDLESQFTSQGQGMQNGDAVSNTDGHDQIGNGQEAEEDKM
ADTEDGGVSEDTELEGSPTPTPQDHSETDSQAKDQTAVKMEEEEEDGTEEEADRDKDIVS
VGPSVPDELFQMVKSLADSTGLTPGNDATELTAASQSENPAAGSTRKSHDTQKEKAMPKV
KNLILKLTPVPMVTTRASRSKSNDKDGGKERSKDGGKERSKDGGKERSKDGGKERSKDGG
KERIKDGGKERIKDGGKERSKDGGKERSKDGGKERIKDGGEEKERSKDGGKERSKDGGKE
RSKDGGKETSKDGGEEKERSKVGGEETIKDGGEEKEKSKDGGKERSKDGGKERSKDGGEE
RSKDGGKERSKDGGKERSKDGGKERSKDGGKERSKDGGKEKERIKDGGKERSKDGGKERS
KDGGKERSKDGGKERSKDGGKERSKDGGKEKERIKDGGKERSKDGGKEKERSKDGGKERS
KDGGKKERSKDEGKEVEGGGASEEDSRCSSRTKTTPLRKSSEGKNKMSASSQENSDSEGE
EKSPSKLKRRTVGSSEKKRGNEEEKEGKESKVSSMLTSDPSKQDVDSDSDEVPDILVQTA
AAEHSSDEDVQQDADSNQGNKRVKKCLFKLSKKDGEDEEDEVVEEEVGEEDEVVGEEDEV
VGEEDEVVGEEDEVEEEEVGEEDEVEVGEEEGEEVGEEEGEEVGEKEGENDKEKTDKKPA
TKRKLKADDSDNSESDSDEYAKKKKKSSTASAKKTSKKKKKNSGGSSNSDSDLEKEMKGL
SKLGPGKRRSSRVKKERKEKENKGGDRRRSYELKRKARGRGAKQQDSSSDDMEEEEEEEG
GGSGEESGDQQKIKPIVEETVVAGRGTFHQSSGEEGNQDASQMAVDDDDDDPENRIAKKM
LLAQIKANYSSGAEESSDEDGDEKEQRKGGEEEEEEEADDNDEEEEEEEGDSGSDVDVKK
SGGRRHRLLRHKLTLSEGESGEEKEKPASKGKKETKRTRRKVGSDDSADLDSEESASSSE
SGVSEEISEESEESEEESEEGSSRRRTTRSSKKKKKKKEERSYAQKKKRRRIKVQDSSSD
EKSGSGEDGSGKEDGDTPKGQRKKIRKILKDDKLRTETRDALKEEEERRRRISEREQLRE
KLRETLYVPPDQVLVVEEASAVACPITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQVDG
VQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLDFSTALIVCP
LNTVLNWLNEFEKWQYGFKDEESLEVTELATVKRPQERAAALQQWQEDGGIMIIGYEMYR
NLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAISKAMNSIKTRRRVVLT
GTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFVNPIQNGQAADSTDQDVRIMKKRAHIL
YEMLNGCVQRRDYSALTKFLPPKHEYVVSVRVTPIQCTLYRHYLEHLTGAGNAVEGGRGR
AGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETDESSMSMTSEDE
KQKKKKKRGKARKKDSDSDSDALEVIKEWNTSSRGGDPSSRNRAEPEEEVRPASSPGTRS
PDWHKEFVTEADSEILEHSGKMVLLFEILRMAEEVEDKVLVFSQSLISLDLIEDFLELAG
RAKEEEKQSPYKGEGKWFRNIDYYRLDGSTNALNRKKWAEEFNDYSNVRGRLFLISTRAG
SLGINLIGANRVIIFDASWNPSYDIQSIFRLYRFGQLKTCYVYRFLAQGTMEEKIYDRQV
AKQSLSFRVVDQQQIERHFTMNELTELYAFEPDLLDDPTGKKSKRTTPMLPKDPFLAELL
HSNKEQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRVNHGAYGGQMDMG
GANSYFPFNVAALASMSNPQLEELINQGRQKVMEATNSLKFLPRESLEDTIGRVWKENPA
LTEAQVQAMALGRQASVEMELKRREAVYRDVLNKQQTLMMYVQKVITNRKVREQQMAMAN
QAQLMSQMNGMLGAGGMSQMELLGLYQQLGALQGHPTHPSMGGKNPGPSKGNL
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaggaggaggaggctgggagctcaacagagactgagagaccctcctct
tctcacaccaagaggaagcctgctgccgcagccaagcaagttggagggaatgagtccgac
acctcggacgagagtggacaggaagatggcgcctcagatgggatgttggttgtgcagcct
cccgctgggactgacaacaaggaggacaagagcagaggagccatgaagctccgagtggac
ctctcacggagaaagacaggtaaaatgagcaaggcctcagctgaatctacagaccaagtg
atggaggaggaagtaggtccgcctccgattacagaccagatggaggaggaggaggaggct
gggagctcaacagagactgagagaccctcctcttctcacaccaagaggaagcctgctgcc
gcagccaagcaagttggagggaatgagtccgacacctcggacgagagtggacaggaagat
ggcgcctcagatgggatgttggttgtgcagcctcccgctgggactgacaacaaggaggac
aagagcagaggagccatgaagctccgagtggacctctcacggagaaagacagataccact
ctgcaggagagaatagactgcaccgcctgtggacagcaggtcaaccacttccagcgccac
tcagtgtttgagcaccccatgctccatgtgctcctctgcaagtcgtgctataagtattac
accagcgatgacatcaacaaagacgaggacggcatggacgaacagtgcaggtggtgtgct
gaagggggcaacctgatctgctgtgactactgccacaacgccttctgtaagaagtgtatc
ctgcgtaacctggggcgcaaggagctgtccatgatcaccgacgacgacagtaaatggtcc
tgctatatctgcagccctcagcccctctcagacatcgcctccaactgctccaacatcatg
accaagctggagagcttctggcgtacgggacgcaagaaagagagggaggtgaaagggcac
agtaagggtaaaggtcaccaccaccatggtaaagctgtggtgaacggtaaggagcattca
gacgggtcagggaccctcaccttctcctataagaccctgaaagtccccaaggagctggtg
aagaggaccaagaagctgattgagacgaccacagggctcaacaacaccttcatccatttc
atccagcaggctgaggaggagcagggagcaggaggaggtggcagcgggaccagacacaga
cacctcaaggccttcaggtctgttctggctgacctgaagaaggcccacgctgccctagag
aaggacttggagtcacagttcacttcccagggccaggggatgcagaacggggatgctgtc
tccaacaccgacggccatgatcagataggcaatgggcaagaggcagaagaggacaaaatg
gccgacacggaggatgggggtgtgtcagaggacacagagctggaagggagccccaccccc
acgcctcaggaccactcagagacagacagccaggctaaagaccagacagcggtgaaaatg
gaggaggaggaggaggatggaacagaggaagaggctgaccgggataaagacatcgtgtcc
gtcgggccgtccgtccctgacgagctcttccagatggtcaagagtctagcggactccaca
gggttaacgcccggtaacgacgccacggaactcacagcggctagccaatcagagaacccc
gccgctggctcaaccaggaagtcacatgatacccagaaggagaaggccatgcccaaggtt
aagaacctgatcctgaaactgacgcctgttcccatggttaccacacgcgcctccaggtct
aagagcaatgataaggatggagggaaggagaggagtaaggatggagggaaggagaggagt
aaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggatggaggg
aaggagaggattaaggatggagggaaggagaggattaaggatggagggaaggagaggagt
aaggatggagggaaggagaggagtaaggatggagggaaggagaggattaaggatggaggg
gaggagaaggagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggag
aggagtaaggatggagggaaggagacgagtaaggatggaggggaggagaaggagaggagt
aaggttggaggggaggagacgattaaggatggaggggaggagaaggagaagagtaaggat
ggcgggaaggagaggagtaaggatggcgggaaggagaggagtaaggatggaggggaggag
aggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggat
ggcgggaaggagaggagtaaggatggcgggaaggagaggagtaaggatggagggaaggag
aaggagaggattaaggatggagggaaggagaggagtaaggatggcgggaaggagaggagt
aaggatggcgggaaggagaggagtaaggatggcgggaaggagaggagtaaggatggcggg
aaggagaggagtaaggatggagggaaggagaaggagaggattaaggatggagggaaggag
aggagtaaggatggagggaaggagaaggagaggagtaaggatggagggaaggagaggagt
aaggatggagggaagaaggagaggagtaaggatgagggtaaggaggtggagggaggtggg
gcctccgaggaggacagccgatgctctagccgcacaaagaccacacccctcaggaagtca
tcggaggggaaaaacaagatgtctgcctcctctcaggagaacagcgactcagaaggcgag
gagaagagccccagcaagctgaagaggagaaccgtgggcagctccgagaagaaacggggg
aacgaggaggagaaggaagggaaagagagcaaggtctcctccatgctgacctctgaccct
tctaaacaggacgtggactccgattctgacgaggttccagacatcctggtccagactgca
gcggcggaacacagctcggacgaggatgtgcagcaggacgccgacagtaaccagggcaac
aagcgcgtcaagaagtgcctgttcaaactcagcaagaaagacggggaggatgaggaggat
gaggtggtggaggaggaggtgggagaggaggatgaggtggtgggagaggaggatgaggtg
gtgggagaggaggatgaggtggtgggagaggaggatgaggtggaggaggaggaggtggga
gaggaggatgaggtggaggttggagaggaggagggagaggaggttggagaggaggaggga
gaggaggttggagagaaggagggagagaatgacaaggagaagactgacaagaagccggca
accaaacgcaaactgaaagccgacgactccgacaactcagagtctgactccgatgaatac
gcgaagaagaaaaagaagtcctccacggcttctgccaaaaagacatccaagaagaagaag
aagaactcgggcggctcctctaactccgactctgacctggaaaaggagatgaagggactc
agcaaactggggccggggaaacggaggagcagccgcgtgaagaaagaaagaaaggagaag
gagaacaagggcggggatcggaggcggtcgtacgaactgaaacgcaaagccagaggtcga
ggagccaagcaacaagattcatcgtctgatgacatggaggaggaagaggaggaggaggga
ggagggtctggagaggagagtggagaccagcagaagattaaacccatcgtggaggagacg
gtggtagcagggaggggaaccttccaccagtcctcaggagaagaaggtaaccaggacgct
tctcagatggctgttgatgatgatgatgatgatccagagaacagaattgccaagaagatg
ctgctggcccagatcaaggccaactattcttcaggagcggaggagagctctgacgaggac
ggagacgagaaggaacagaggaagggaggagaggaggaggaggaggaggaggcagatgac
aacgatgaggaggaggaggaggaggaaggggactctggctctgacgtggatgtgaagaag
agtggggggcgtcgccaccggctgctccgccacaaactgacgctgagcgagggagagtca
ggagaggagaaggagaaaccagccagcaaggggaagaaggagaccaagaggaccagacgg
aaagtgggtagtgatgactcagcagacttagactctgaggagtccgctagcagcagtgag
tcaggagttagtgaagagatcagtgaggagtcagaggagtcagaggaggagtcagaggag
ggcagcagtcgcaggaggaccacacgctcctccaagaagaagaagaagaagaaggaggag
aggagctacgcccagaagaagaaacgacgccgcatcaaggtccaggactcttcatccgac
gagaagagcgggtcaggagaggacggctcggggaaggaggatggagacacacctaaagga
cagaggaagaagatcagaaaaatcctcaaggacgacaagctgaggacggaaacgagggat
gccctgaaggaggaggaggagaggaggagacgcatctcggagagggagcagctcagggag
aaactcagagagactctatatgtccctcccgaccaggtactcgtggtggaggaggcgtcc
gccgtggcttgtccaatcacaaccaagctggtgctggatgaggacgaggagaccaaggag
cccatggtgcaggtccaccgcaatctggtcactaaactcaaaccacaccaggtcgacggg
gtccagttcatgtgggactgctgttgtgagtcggtgaagaaaaccaacaagaactctggt
tctggatgtatcctggctcactgtatgggcctggggaaaacactgcaggtggtaacccta
ctccacacactactgctgtgtgaaaagttagacttctccacggctctgatcgtctgtcct
ctcaacacggtgctcaactggctcaatgagtttgagaagtggcagtacggcttcaaggat
gaggagagtttagaggtgacggagctggccacggtgaagcgacctcaggagagagcggct
gctctgcagcagtggcaggaggatggagggatcatgatcattggctatgagatgtaccgt
aacctcacacagggtagaaacatcaagagcaagaaactcaaagagaccttccagaagacc
ctggttgacccaggcccagactttgtgatctgtgatgagggccacatcttgaagaacgag
gcgtcggccatctctaaagccatgaactccatcaagacccgacggagagtggtgctcacc
ggcacaccgctgcagaacaacctcatagagtaccactgcatggtgaacttcatcaaggag
aacctgctggggtcagtgaaggagttcaggaaccgcttcgtcaaccccatccagaacggg
caggcagcagactccacggaccaggacgtacggatcatgaagaagagggctcacatcctc
tacgagatgctcaacggatgtgtacagagaagagactactctgccctgaccaagttcctg
cctcctaaacatgagtacgttgtgtccgtcagagtcacacccatccagtgtactctatac
cgacactacctggagcacctaacaggtgcggggaacgcggtggaggggggtcggggtcga
gccggcaccaaactgttccaggacttccagatgctcagcagaatctggacccatccctgg
tgcctgcagctggactacatcagcaaggaaaacaaggggtactttgacgaagacagcatg
gaagagttcatcgcctcggagaccgatgagtcttctatgagcatgacctctgaagacgag
aagcagaaaaagaagaagaagcgggggaaagccaggaagaaggacagcgactcagacagt
gatgctctggaggtgataaaggaatggaacaccagctcccgcggaggagacccttccagc
cgcaaccgggcggagccagaggaggaagtgcgtccagcctccagccctggcaccaggagt
cccgactggcacaaagagtttgttacggaggccgactctgagatcctggagcattctggg
aagatggtgctgctgtttgagatcctccgtatggccgaggaggtggaggacaaagttctg
gtgttcagtcagtctctgatctctctggacctgattgaagatttcctggagctggctggc
cgagccaaagaggaagagaaacagtctccctacaaaggtgaggggaagtggttccggaac
atagactactaccgcttggacggctccaccaacgccctgaaccggaagaagtgggcagag
gagttcaatgactacagcaacgtccgaggtcggttgttcctgatctcgaccagggctggt
tctctgggcatcaacctgataggagctaaccgggtcatcatctttgacgcgtcctggaac
ccgtcgtacgacatccagagtatcttcaggctctaccgcttcggacagctcaagacctgc
tacgtctaccgattcctggctcagggtactatggaagagaagatctatgaccgccaggtg
gctaaacagtctctctccttccgagtggtggatcaacagcagatcgagagacatttcacc
atgaatgagctgaccgagctctacgcctttgaacctgaccttctggatgatcccactggc
aagaagagcaagaggaccactcctatgctaccaaaggaccccttcctagctgagctgctc
cacagcaataaggagcagattgtgggctatcatgaacacgactccctgctggatcacaag
gaagaggaggctctcagcgaagaggaccgcaaagcagcctgggccgagtacgaggcggag
aaaaagggtctgtctatgcgtgtgaaccatggagcgtacggaggacagatggacatggga
ggagctaacagctacttccccttcaacgttgccgcactggcctctatgtccaacccccag
ctggaggagttgatcaaccagggccgtcaaaaggtgatggaggccaccaactctctcaag
ttcctccccagagaatctctagaggacaccatcgggagagtgtggaaggagaacccggcc
ctaacggaggcccaggtccaggccatggctctggggagacaggccagtgtagagatggaa
ctcaaacgaagagaagctgtctacagagacgtcctcaataagcaacagactctgatgatg
tacgttcagaaggtgatcaccaacaggaaggtgagagagcagcagatggccatggccaac
caggcccagctgatgagccagatgaacggcatgctgggagctggagggatgagccagatg
gaactcttggggttgtaccaacagctgggggcgctacagggtcatcccacgcacccctcc
atgggcggcaagaaccccggcccctccaagggcaacctgtaa
DBGET
integrated database retrieval system
