Salvelinus fontinalis (brook trout): 129858949
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Entry
129858949 CDS
T11136
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129858949
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129858949
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
129858949
NCBI-ProteinID:
XP_055784176
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All DBs
Position
7:complement(7341554..7367256)
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AA seq
527 aa
AA seq
DB search
MDGMGDVAVGVKRGSDELMSTSVYNSGSEMSSISDVTANGSDSKSNGSDSKKLRVEDRME
APPSRVLHIRKLPNETSESEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMINYY
STVTPHVRNVPVFIQYSNHKQLKTDSGNQRAQAVLQAVSAVQGGGTPTSGSIADLTAASS
PVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPPTAQQAKIAL
DGQNIYNSCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKD
SNSLLGGLSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMVTPQSLFTLFGVYGD
AQRVKILYNKKDSALIQMADANQAQLAMSHLNGQKMHGKAIRVALSKHTSVQLPRDGLDD
QGLTKDFTNSPLHRFKKPGSKNFQNIFPPTTTLHLSNIPTDVTEEDLRLLFSNAGGTVNA
FKFFQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatgggagatgttgcagttggtgtgaagagaggatcagatgagttgatgtca
accagtgtctacaacagtggatctgaaatgagcagtatcagtgatgttacagccaatggg
agcgacagtaaatccaatgggagcgacagtaaaaagctgagagtggaagaccggatggag
gcccctccctctcgtgtgctgcacatcagaaaactgcccaatgaaacttcagaatcggag
gtcattgccctggggttacctttcgggaaggtcacaaatatcctgacgcttaaggggaaa
aaccaggctttcttggagctggggacagaggaagcagcaataaccatgatcaactactac
tctactgtgacaccgcatgttcggaacgtccccgtattcatccagtactccaaccacaaa
caactcaaaacagatagtggaaaccagcgggcccaggccgtcctgcaggcggtgtcagcg
gtccaaggaggtggtactcctacgtcaggctccattgcggatctaaccgctgcatcaagc
cctgtgctcagaataatcattgacaacatgttctacccagtcactctggatgtgctgcag
cagatcttctcaaagttcggcacggtcatgaagataatcacattcaccaagaacaatcag
ttccaggctctgctgcagttcaacgacccaccgaccgcccagcaagccaaaatagccctg
gatggtcagaacatctacaactcgtgctgtacgctccgcatcgactactccaagctggtc
aacctgaacgtcaagtacaacaacgacaagagccgtgactacacccggccagagctcccc
gccggggacggacagcctgccatggaccccaacatggctgctgccttccaaggcaaggac
tcaaactctctgctcggtggcctgagcccgctgaatgctgctgcagcggcggctgctgct
gcagggagggtagctctgtctggtcactctggctccagcggcgtgctcctggcctccaac
ctcaacgaagagatggttacgccccaaagtctgtttactctcttcggggtgtatggcgat
gcccagagggtgaagatcctctacaataagaaagacagtgctctgatacagatggctgat
gccaaccaagcccagctagctatgagtcacctgaatgggcagaagatgcatgggaaagcc
atcagggtggctctgtctaagcacacctcagtgcagctgcccagagatggactggatgac
cagggcctcaccaaagacttcactaactcgcccctgcaccgcttcaagaagcccggctcc
aagaactttcagaacattttccctcccaccactactcttcacctctccaacatcccaacg
gacgtaaccgaggaagacctccgactgctgttctccaacgccgggggaactgtgaacgct
ttcaagttctttcaggatcacaaaatggcgctgctccagatgtcgacggtggaagaggcc
atccagggtctgatcgacctccacaattacaacatgggtgacaaccatcacctgagagtc
tccttctccaaatccaccatctaa
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