Salvelinus fontinalis (brook trout): 129858960
Help
Entry
129858960 CDS
T11136
Name
(RefSeq) transforming growth factor beta activator LRRC33-like
KO
K26317
transforming growth factor beta activator LRRC33
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129858960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_EndoS
LRR_5
LRR_NXF1-5
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
129858960
NCBI-ProteinID:
XP_055784192
LinkDB
All DBs
Position
7:complement(9427477..9444352)
Genome browser
AA seq
715 aa
AA seq
DB search
MLRCSSTASSPTLLCLTLWSLCSLLMPAFCQPHHSPCRLTQKTALCSNSELSSVPEGLPD
SIEDLHLNHNHIQTLQDDSLSRYVSLRTLNCADNRLETAGSKLFHNSPHLESLNLAANNL
HVGYRQTSLALLTLSRLRVLDLSENQLTEDMVSVLLQNMTSLEYLNLSRNLLLRLDESSF
SDLHQLRELDLQRNMLFEIDESFDHLHKLQRLNLAFNYLPCLVHFHMTQLVVLNASHNAI
EWFIANQDLQEVFQLETLDLTDNNLLFFPFLPTHSRLRNLHLSQNRVSFYEHLADTAAYP
NWKTSVQFYNLRGNMSNVTAKLWDESLHGDISSLDLLDLSGNQVGYFPKGFISKMPSLTR
LRMWTNCLEVLNLTKEKLPGTLYELDVSNNRLTELHADQVSLRQLGNLSFLNLSQNDLQS
LPAQLFSSLTSISSVDISYNRVGVCPLEAWGGGMGGGNQSDCVVWRNIISLRYLHLSGCN
LGRLPSLAFVGTPLTHLELSNNPELVIGPRSINDLSRTLHHLGLGNTGLKHFDFSPFHHL
KSLNISRNSLTQLPASLQHLELRLLDLRDNKLTTVPSAQANVLATKLHTVFLNGNTFNCC
QLDWYRTFERVKTVTIMDLSDISCQDLTKRTHRVVLVDSLICGGSDGESVYWYILLFIVP
VLCLVGMSVIFLLTFRPRLLPMAIKNTCWSHLPCVVEEKSNKGDTGRVQIPILEF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttaagatgctcatccacggcctcttcccctaccctgctctgtctaaccctctggtcc
ctgtgtagcctcctgatgcctgccttctgccagcctcaccacagcccctgcagactgacc
caaaagactgctctctgtagcaacagtgagctctcgtctgtacccgagggcctacctgac
agcatagaggacctccacctgaaccacaaccacattcagacgctacaagatgactccctc
tcccgctacgtctcccttcgtactctaaactgtgccgacaaccgcttggagacagcgggg
tccaagctctttcacaactcacctcatctagagagcctcaatctagctgccaataacctt
cacgttggataccggcaaactagcctggcgctgctcaccttgtctagactcagagttctg
gatctgtcagaaaaccagcttacagaggacatggtctccgtcctcctccagaacatgacg
tcgctggagtacctcaacctttccaggaacctcctgttgaggctggatgaaagctccttc
agcgacctccaccagctcagagagctggacctgcagaggaacatgctgtttgagattgac
gagtccttcgatcacctgcacaagctccagagactcaacctggccttcaactacctgccc
tgcctggtgcacttccacatgacccagctggtggtcctcaatgccagtcacaatgccatt
gagtggttcatagccaaccaagacctccaggaagtcttccagctggagaccctggatctc
acagacaacaacctcctcttcttcccctttctgcccacccacagccgcctgaggaacctc
catctgtcccagaacagggtgagcttctacgaacacctggcggacaccgctgcctacccc
aactggaaaaccagtgtccagttctacaacctgaggggcaacatgagcaacgtcacagcc
aagttgtgggatgagagcctgcacggggacatctcctctctagacctgctggatctgagt
ggaaatcaggtgggctacttccccaaagggttcatcagcaaaatgccaagcctgaccaga
ctcaggatgtggacaaactgtctcgaggtcttgaatctaactaaggaaaagctgccgggg
acgttgtacgagttggacgtgagcaacaataggttgacagagctccacgccgaccaagtt
agtttgagacagctaggcaacctgagcttcttgaacctgagccagaatgacctgcagagt
ctacctgctcagctgttttcctctctcaccagcatcagctctgtggatattagctacaac
agagttggcgtgtgcccccttgaggcatggggtgggggcatgggtgggggtaaccaatca
gactgtgtcgtttggagaaacataatttctctgagatatctccacctatcagggtgcaac
ctggggaggttgccatcattagcattcgtagggacgcccctaacacacctggagctgtct
aacaacccagaactcgtcatcggacccagatcgataaatgacctcagcagaactttacac
catctaggattgggaaacacaggcctgaaacactttgacttctctcctttccaccacttg
aagtctttgaacatttccagaaactctcttactcagctccctgcttcactgcaacatctg
gagctgaggctgctggacctgagggacaacaaactgaccaccgtcccctcagcccaggct
aacgtgttagccacaaaactccacactgtttttctcaacggaaacactttcaactgctgc
cagttggactggtacaggacgttcgagagggtaaaaactgtcactatcatggacctctca
gatatttcatgtcaggatctgaccaaaaggacacacagagtggtgcttgtagactctcta
atatgtggcggtagtgacggagagtctgtgtactggtacatcctgctgtttatcgtacct
gttctctgtctggttggaatgtctgttatcttcctgctcacctttaggcccagactgctt
cccatggccattaaaaatacatgctggagtcaccttccctgtgttgtggaagaaaagtcc
aataaaggagacactggccgtgtccaaatacccatactagagttctaa
DBGET
integrated database retrieval system
