Salvelinus fontinalis (brook trout): 129859274
Help
Entry
129859274 CDS
T11136
Name
(RefSeq) phenolphthiocerol/phthiocerol polyketide synthase subunit C-like
Organism
sfon Salvelinus fontinalis (brook trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PP-binding
adh_short
PKS_DH_N
ACP_SdgA_C
CurL-like_PKS_C
ADH_N
Thiolase_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
129859274
NCBI-ProteinID:
XP_055784807
LinkDB
All DBs
Position
7:25397080..25411871
Genome browser
AA seq
2105 aa
AA seq
DB search
MEDAEDDIAVVGIGCNFPGGEGLDSFWKVLLEGKNCTVPIPTERFDCSQWYDPDDNKVGK
SRTAKAALIDGFNQFDHKFFGITETEVEQMDPQQKYLLQCTYRALENAGIPMEKASGTRT
GVFLGLMNRDYEQSAGSVNPNIINHCTGTGLAMSLASNRVSYVFNFTGPSMSIDSACSSS
LVALHFACQAIRQGDCEMALCGGVSCIIQPRVFVALSKAKMISPEGTSKPFSSRADGYGR
GEGCGVILLKPLKQALKENDHVWGIIRKTAVNQDGRTVTPITKPSMVQQEELLRRIYSQS
DLSTVQYIEAHGTGTPVGDPIEASSISNVIAKARPPGSETLRIGSVKGNIGHTESAAGVA
GLIKVLLMMKHEIIVPSLFYSEDSASIDAKALNVKVPTEAEKWGDSVERVAGINNFGFGG
TNAHVIVKQHKQSQVSRKSGRKAHKYFVLSASSEKSISMMMEDTIQQIDKDNKVDLEALA
YTSACRRSHLKHKYKKAFRTSSLVDLKDQLKSALSKTPYPSYSDPRLIFVFCGNGVTYQG
MCKELLKHEPVFREKIREVEILFQMFNNMSILERLESESESKDFSKPEVVQPLLFAIQVG
IASLFKHWGIKPDAILGHSVGEVAAAHCSGLLSLEDAVKVIYFRSTLQSKVTGGKMLVVS
NMAVSEVLNLLPLYLNKVCLAAANSPQSCTLAGDADAIDSLHQKLSSSVKSKNLFLHVLD
VPAAYHSQMMDPILSQIEDSIGSLQVNHVDTELFSTVTGKEVEQPDFSTGKYWARNIREP
VSFEQAVRSATKDKKNVVFVEIGPRRALQRNIQETLGNDTIVMSSVQPEKDHETMLTTVS
KLFESGVQIDWDQFYRGCEASPTHFPVYQFDSTQRDVIIPASKINTAGTHPVLTQTGSEG
NSFSCDLFSDSVSYLHEHKHNGVAIVPGAFYTELGLSAFMLSAKPKVPLNTLQISISFQN
PFVFTKNAPEMKVQLEPAEDETHIKIHSSSSTYASGTIVCKQERLVEEQNISLSSIYKRC
KSVVSSEEFYNVGHGGFQYGTVFQNKGDVHYGEDFKEAFSVVTVPEELLSQLHDYCIHPV
VLDFLMQLAPVTVAHGFSSRPGFPAKIGSLTVFEPLQKEMIVYVRAIDVGVDHFEVCGCF
TDKEGRMLVELKHVMIKYLGSHSRVVEEYFFHNDFRVVSEDIKSSQARKALVFSDQVGVS
KAMQPHLSSMSKYIPFAHAKEFLSRGFPTLLANLNISDIKKNFEEVLFMWGDEELTSVKT
ETVLENIVNCCEIFRQIVLELRARHFPNSIRVITYRSAENTVDRISPGFVLSGMTRACAA
EMADLSFQLIDISSVSTEDIRALSEVLKSYPCSKYQELVVKDGMIFKSDIVHTPMESIES
SGGSMPSSMSEACIFQTADPYRMTSLSAISCEVKKKDIQQKSVEIQLSKISVHSSDYFPV
SVSDLHFGQTIYWNKHTSQNHQLLALDFSGTVTAVGKDVSKLKVGDHVVSCYPVLASSAI
MIPEAACYKTKRLPFLKEAPCVSYFVLAWEILYKALTRVKEQRRLGIISSVPDSGLLKVL
AQTANKSGWNVIVGTQCNGLFVKADKMDAFVLLPPFDESLLAKAGNFPGVRHIVIVCESQ
SQCLLAQSVFQNVKDSVRMQTLQMSSIIQRGSLIAQKPHIYRWLKSMHLDRKSFVLEHST
FQRLTSGSIDFLPVEESESYFSSKTLPVVALGKDDSRGTLSKIPLLPKPNQLFQKSSMYI
VTGGLTGLGFETVKFISQKGGEYIVILSRSSPTPDIQQEICNLEKKYSAHIICMGCDVSV
SEHVLRAIGLIGKKFPSCPIRGVFHSAVVLHDGLIETLDKSLYEKVLKPKVNGALNLHHA
TKHCKLDYFVCYSSVAAFIGNVSQTNYAAANSFLDIFCHYRRNIGLAGQSINWGPLNLGL
LLNKDHFQRFLEAKGLMVMDVTEIRESLEQCLQLNKPQQAICKFNFKNMKYNVMSQNASL
TMRMTALVEEAMQKAKLKESRSGHNAASSSPSGYIRSVLSETIGVDKNELNDDSPLSALG
IDSMLAMTLQNLIFQERGVNVPLVKLLDPNSTLSTLISNLMEGTAGESQNDDQKESMIDD
MFTRL
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgctgaggacgacattgctgtagtgggtattggctgcaatttcccaggagga
gaggggcttgacagtttctggaaggttctattggaggggaagaactgtacagtgccaatc
ccaactgagagatttgactgttcccagtggtatgaccctgatgacaacaaagtggggaaa
tcgcgcacagcgaaggctgcacttattgatgggttcaatcagtttgatcacaagttcttt
ggcatcactgaaacggaagtggaacaaatggatccccagcaaaaataccttcttcagtgt
acgtacagggctctagaaaatgctgggataccaatggagaaggccagtgggaccaggaca
ggggtgtttttggggctaatgaacagagattatgaacaatctgctggaagtgtcaaccca
aatataatcaaccactgcaccggcactggactagctatgagtttagcatccaaccgagtc
tcctacgtcttcaacttcactggaccctcaatgtccattgacagtgcctgctcttcatcc
cttgttgcacttcattttgcttgtcaagccataagacaaggtgattgcgagatggccctt
tgtggtggtgtcagctgtatcatacaaccacgagtctttgtcgctctcagcaaagcaaag
atgatttcccctgaaggcacaagcaaacctttctccagcagagcagatggctatggcaga
ggagagggttgtggggttattctgctgaagccactgaaacaagctctcaaagaaaatgac
catgtatggggcatcataagaaaaactgctgtaaaccaagatggccgcacagtcactcca
atcaccaagccatccatggtccagcaagaggagctgctccgcagaatctactcacagtct
gacctgtcaactgtccagtacatagaggctcatgggactggaactccagtgggggatccc
atagaagcaagcagcatctccaatgtcattgccaaagccagacctccaggttccgagaca
ctccgcatcggctctgtgaaaggcaacattggacacacagaatctgcagctggagtggca
gggctaatcaaggtactcctaatgatgaagcatgaaatcattgtcccttcactgttctac
tctgaggatagtgccagtatcgatgctaaagccttaaatgttaaggttcccactgaagca
gaaaagtggggagattctgttgaaagggttgcagggataaataactttggttttggaggt
acaaatgcacatgttattgtcaagcaacacaagcagtcacaggtttctagaaagagtggt
agaaaagcacacaagtattttgtcctctctgcgagttctgaaaagtctatcagtatgatg
atggaggacacaattcaacagatagacaaagacaacaaagttgatttagaagctcttgca
tacacttccgcttgtaggagaagtcacttaaaacacaaatacaagaaggctttcagaact
tcctctctggttgatctaaaagatcaactcaagtctgccctgagtaaaactccctacccc
tcatactcagatccaaggttaatatttgtcttctgtggtaatggtgtgacctaccaaggc
atgtgcaaggagctcctgaaacatgagcctgtgttcagagagaagatcagggaggtggag
atacttttccaaatgttcaataacatgagcatcttagagagacttgagagtgagtctgag
agtaaggacttttcaaaaccagaagttgtccagcccctactctttgccattcaggttggc
attgccagtctcttcaagcactggggcatcaaaccagatgcaattcttggccactctgtt
ggagaggttgctgctgcccattgctctggtctcttgtcccttgaggatgcagtgaaggtg
atctatttccgcagtactctgcagagtaaggtcacaggagggaaaatgcttgtggtcagt
aacatggctgtgtcagaggtcttgaacctccttcccctctacttaaataaggtttgcctg
gctgctgccaacagcccacagtcctgcacacttgcaggtgatgctgatgctatagacagt
ctccatcaaaagctaagcagttcagtcaagagtaagaatctattcctccatgttctagac
gtccctgctgcataccatagccagatgatggatcccatcctctcccaaatagaggacagt
attggctctttacaggtgaatcatgttgatacagaattgttctccacagtgacagggaag
gaggtagagcagccagacttcagcacaggcaaatactgggccaggaacattcgagagcct
gtttcatttgaacaggcagtgagatcagcaaccaaagacaagaagaatgtggtctttgta
gagataggccctagaagggctctacaaaggaacatccaggagactctgggaaatgacacc
atagttatgtcctcagtgcagccagaaaaagatcatgagacaatgctgaccactgtgtcc
aaactgtttgagtctggggttcagatcgactgggatcaattctacagaggctgtgaggca
tcaccaacacatttccctgtgtatcagtttgattccactcagagagatgttatcattcct
gcatcaaagataaatacagcaggtactcatcctgtgctaactcagacaggaagtgagggc
aatagctttagctgtgatctgttttctgactcagtatcttacttgcatgagcataaacac
aatggtgttgccattgtccctggtgctttctatacagagttgggtttgtctgctttcatg
ttaagtgccaaaccaaaagtgccactcaacacactgcaaatcagcatcagctttcaaaac
ccatttgttttcaccaaaaatgcaccagagatgaaagtgcaacttgaaccagcagaagac
gagacacatattaagatacattcttcctcttcaacctatgcatcaggcacaatagtgtgc
aagcaagaaagactggtcgaagagcagaacatttcgctgagctctatctacaaaaggtgc
aagtcagtggtgagctctgaggagttttacaacgtaggtcatggcgggtttcagtacggc
actgttttccaaaacaagggtgacgtacactatggtgaagactttaaggaggctttttca
gttgtcacagttccagaggaattgctgtctcagttgcatgactactgtattcaccctgta
gttctagacttcctgatgcaactcgctcctgttacagtagcacacggattctcttccagg
cctgggtttcctgccaaaataggcagcttgacagtctttgaacctctgcaaaaggaaatg
attgtttatgtgagagcaattgatgtaggagttgatcactttgaagtatgtggttgcttt
acagacaaagagggaagaatgttggttgagcttaagcatgtgatgatcaagtaccttggg
agccattcacgtgttgttgaggaatacttcttccacaatgacttcagggttgtctctgag
gatatcaagtcctctcaggcacgaaaggccttggtcttttctgaccaggtaggagtttcc
aaagccatgcagccacacttgagctcaatgtctaaatacattccctttgcacatgctaag
gagttcttaagccgtggatttcccacacttctggcaaaccttaatatctcagatatcaag
aaaaactttgaagaggtcttgtttatgtggggtgatgaagaactcacttcagtcaaaacc
gagactgttctggagaatatagtaaactgctgtgagattttccgtcaaatagtcctggaa
ctaagggcgagacattttccaaactccatcagagtaattacttaccggtcagcagagaac
acagtggaccgcatcagcccaggctttgtcctctcaggcatgactagagcatgtgctgca
gaaatggcagatctttccttccagctgattgacatcagctctgtctctacagaggacatc
agagctctgtctgaggtcttaaagtcatacccttgcagcaaataccaggagttggttgtg
aaagatgggatgatttttaaatctgatattgtgcatactcccatggaaagcattgagagc
tctgggggaagtatgccctcttcaatgtccgaggcatgtatctttcagacggctgacccc
tacagaatgactagcttgtctgccattagctgtgaggtcaagaaaaaggacatccagcag
aaatcagttgagattcagctcagtaagatatctgttcattcctcagactactttcctgtc
agtgtctctgatctgcactttggccagacaatttactggaacaaacacacatctcagaac
caccagcttttggcccttgacttcagtggcactgtcacagctgtagggaaagatgtgagc
aaactgaaagtgggagaccatgttgtctcatgctaccctgttcttgcatcctctgcgatc
atgattcctgaagcagcatgctacaaaacaaagaggctcccatttctaaaggaggctcca
tgtgtgtcctactttgtgctggcatgggaaatcttgtacaaagcgttaactagagtcaaa
gaacagagaaggttggggatcatctcctctgttcctgattctggtctgctcaaggtatta
gcccaaacagcaaacaaatcaggatggaatgtcattgtagggacacagtgcaatgggctg
tttgtaaaagctgataaaatggatgcatttgtcctccttccgccatttgacgaatctctg
ttggcaaaagcaggcaatttccctggtgttagacacattgtcattgtctgtgaatcccag
tcccagtgcttgctggcacagagcgttttccaaaatgtgaaggatagtgttcgaatgcaa
acccttcaaatgtccagcatcatacaaaggggatcactcattgcccagaagccacacatt
tatcgttggctcaagtccatgcatttggacaggaagtcatttgttctggaacactctacc
tttcaaaggttgacatcaggaagcattgacttcttgcctgttgaggagtctgaatcgtat
tttagctcaaagaccctgcctgttgtggcactaggtaaagatgattccagaggcacactg
tccaaaattcctttgttgcctaaaccaaatcagcttttccaaaagagttctatgtacatt
gtcacaggtggcctcactgggctgggatttgaaactgtgaaattcatttctcagaaaggt
ggagagtacattgtcatactctccagaagtagccccacacctgacatacagcaggagatc
tgcaatctggagaagaaatacagtgcccatatcatatgtatgggatgtgatgtctctgtt
tctgagcatgtgctcagagcgattggtctcattggcaagaagtttccctcttgtccaatc
agaggagtgttccacagtgcagttgtcctgcacgatggcctgattgaaacccttgacaaa
tctctgtatgagaaagtcctgaagcccaaagtgaatggggctttgaatctacaccatgcc
acgaaacactgcaaattggattactttgtgtgctactcctctgttgcagctttcattggc
aatgtctcacaaacaaactatgcagcagccaattcattcctggacatattctgtcattat
agacggaatattggactagctgggcaatccatcaactgggggcctttgaaccttggtctc
ttgctgaacaaggatcatttccaaaggtttcttgaggcaaagggattgatggtgatggat
gttacagagattcgcgaaagtctggaacaatgcctccagctaaacaaacctcaacaggct
atatgcaagttcaatttcaaaaacatgaagtacaatgtcatgtctcaaaatgcctcattg
accatgcgtatgactgcattagtggaagaggcaatgcaaaaagccaaattgaaagagtcc
cggtctggacataatgctgcttcctcctccccaagtggttatatcagatctgtactcagt
gaaacaatcggtgttgacaagaatgagttgaatgatgattctcctctctctgccttaggc
attgactcaatgttagccatgactttgcagaacctgatctttcaggagaggggagtgaat
gtgccactggttaaattgctggacccaaacagcacactgtcgacattgatatcaaacctg
atggagggcactgcgggtgaatcccagaatgatgaccagaaagagagcatgatagatgac
atgttcacaagactatag
DBGET
integrated database retrieval system
