Salvelinus fontinalis (brook trout): 129859361
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Entry
129859361 CDS
T11136
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129859361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129859361
03036 Chromosome and associated proteins [BR:
sfon03036
]
129859361
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129859361
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129859361
PBAF complex
129859361
GBAF(ncBAF) complex
129859361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129859361
NCBI-ProteinID:
XP_055785025
LinkDB
All DBs
Position
7:complement(29607878..29659588)
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AA seq
532 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPAVRPGL
PAPVMEPSRKRPAPSQQVQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLA
RLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLT
NLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEIASLDN
KVGQPHKKDSQSQLPKMTFKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDL
KLMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYSKIQQRRQELEQALAVRNT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagacggcagggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccgtctggagcgaggatgccccaccaaggt
gctcccatggggccccccggacccccgttcggtgggagccccgcggtgcggcccggcctg
cccgccccggtcatggagcccagccgcaagagacctgccccctcccagcaggtccagcag
cagcagaacgtccagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgagctggtcccg
gagtcccaggcttacatggacctgttggcctttgaacgtaaactggaccagaccattatg
cgtaaacgggtggacatccaggaagccctaaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcctgacgctgacgactcagacggc
agtattgcatcatgggagctgcgggttgaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctcgttcttcaagagcctggtgatcgagctagacaaagacctgtat
ggtcctgacaaccacctggtagagctgctgaccagtaaagcgaagtggcaccgcactccc
accacccaggagactgacggcttccaggtgaagaggccaggggacgtgagcgtgcgctgc
acactgctgctaatgctagactaccagcccccccagttcaagctggaccctcgtcttgct
cgcctgctgggtatccacacccagacccgctcctgtatcatccaggccctgtggcagtac
gtcaagaccaacaagctgcaggactcccacgacaaggagtacatcaactgtgacaagtac
tttcagcagatctttgactgcccgcggctcaagttctcggagatcccccagcgtctcacc
aacctcctcctaccccctgaccccatcgtcatcaaccacgtcatcagcgtggaccctaac
gaccagaagaagacggcgtgctatgacatcgacgtggaggtggaggaccccctgaagggc
cagatgagcagcttcctgctctccactgccaaccagcaggagatcgcctcactggacaac
aaggtgggacaaccacacaagaaggatagccaatcacaattacccaagatgacctttaag
atccacgaaaccattgagtccatcaaccagctgaagatccagagggactttatgctcagc
ttctccagggatcctaagggctacatccaggactggctaaagtcccagagcagagacctg
aagctgatgacggacgtggtggggaacccggaggaggagaggagggcggagttttaccac
gagccctggtcccaggaggccgtcagtcgttacttctacagcaagatccagcagaggaga
caggagttggagcaggccttggctgtgaggaacacctaa
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