Salvelinus fontinalis (brook trout): 129859589
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Entry
129859589 CDS
T11136
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129859589
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129859589
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129859589
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129859589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Sec7-like_HUS
TOR1L1_N
Adaptin_N
Cnd1
MMS19_C
HEAT_DAAF5
ParcG
Paxt-1_C
MMS19_N
KH_DEAH11_1st
ZapG-like
Motif
Other DBs
NCBI-GeneID:
129859589
NCBI-ProteinID:
XP_055785502
LinkDB
All DBs
Position
7:complement(49469641..49508965)
Genome browser
AA seq
1569 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQDLEQDQTMLDRMVDGIATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRTGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLCSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVDFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNKFDHCAESIMPTLLTLVSNS
AKVMATSGITVIRLIIRHTHYPRLIPIVTSSCQSKSVAVRRRCFEFLDLLLQEWQTSSLE
RSVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAASSRGPSTPGSLQRSRSDV
DVNAAATATASAKTRMTPVPASPAPFSAASALPPGSYASLGRVRTRRTSSGSGVGASSSV
TDSRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRIPRATGAATPADRRPKVPRSHGCSRD
TSPDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRSTSALHSAES
VGRSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPVRRLYESPG
IYSDDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQ
SLLVSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLHREDLQDWLFVLLT
QLLKKMGADLLGSVQAKVQKALDVTRDSFPLDQQFNILMRFIVDQTQTPNLKVKVAILRY
IECLARRMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTML
LGALPKTFQDGATKLLHSHLRNSSNTGVASPSSTMGRTPPLPRHPSSRSSPLTSPTNCSH
AGGLSPSRLWGWSADGLSKYPPPFPSLSSTPAAPSLKTLRSAYSPSMLEYDTENLNTDQI
YSSLRGVTEAIQNFSFRSQEDLMEPGRVKREDTPGVGTASHSGVDVVEGPGGRTALDNKT
SLLNTPSPRSFSGPRGRDYNPYNYTDTISAYDKAALRETVYEDDVEQLRDGRQECGGENK
MLHTKNSSPAEQLELAGELLKELSNPSERPEERRGALVELLKIAREDSLAVWEEHFKTML
LLLLETLSDQDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAE
ESASTLAGSIHPEQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESLHQLLPDIIPG
LLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNS
SSSSDISSY
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggaatactgtatggagcaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggacctg
gagcaggaccagaccatgctggacagaatggtggatggtatcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactctcagctttagtaacaaga
ttacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtcagagaccaggaccaagctcttctactaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggaccagggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctacagacacgtcggggag
agggtgcggatggacctggggaaaaagggactaccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagaacggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaagacagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcgacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
tttatccgtgccttcgaggaagttcccgccatgcaactttgctctaacagggaaatggag
gatgccatgaccaagatcagagaggtgctggccgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggagcggtggactttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aagtttgatcattgtgctgagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccgggatcaccgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgaccagcagctgccagtcgaaatctgtggccgtgaga
aggcgctgttttgagttcttggacctcttgctgcaggagtggcagaccagctctctagag
aggagtgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtccgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggcttcctccagaggtccctccaccccgggctctctccagcgttcccgtagcgacgtg
gacgtgaacgctgccgccaccgccaccgctagtgccaagaccaggatgactcccgtgccc
gcctcgcccgcccccttcagcgctgcctccgctctgccacccggctcctacgcctctcta
ggccgtgtgcgtaccaggagaacgagttcggggagcggtgtgggggcgagttcctctgtc
acagacagtagggggagaagtcgagccaaaatggtgtcagtgtctcaacctggcagtcgt
tctggctcccctggtcgtctcctgagccatacatacggcaggatccccagggcaactgga
gcggcaacgccagcagacaggaggcctaaagtcccccgcagccatggctgcagccgagac
accagtccagacagatcaggcctggcgaggagtcgtatcccccggcccagcatgagtcag
ggctgcagcagggacacctctagggagagcagccgggacaccagccccgctcggggattc
tctcctctggcatccagacgtgtctcccgctccaccagtgctctccactcggctgagtct
gtgggccgctcagagcgtctaggtctggcccaccaggcccgtatctcagcctctgtcaac
gccatgaggatcctcaacactgggaccgaggtggaggcagctgtagccgatgccctgtta
ctaggagacgccaggaacaacaagcggcggccagtcagacggctgtacgagtctccgggc
atctactcagacgacgacgctaacagcgacgccagcagcgcctgctctgagcgctcgtat
ggctcgcggaacggtggcccgccccactacatgagacagacggaggacgtggccgaggtg
ctgaaccactgtgccagttccaactggtctgagaggaaggaggggctgctgggactacag
agcctgctcgttagccagagaattctcagtcgcgtggagctgaagagattgtgtgagatc
ttcacaaggatgtttgccgacccacacagcaaggtgttcagtatgtttctggagaccctg
gtagacttcatcaccctgcacagagaggacctgcaggactggctgtttgtcctgctcacc
cagctgctgaagaagatgggagcagacctcctgggttccgtacaggccaaggtccagaag
gctctggacgtcaccagggactcgttcccgttggaccagcagtttaacatcctgatgcgt
ttcatcgtggaccagacccagacccccaacctgaaggtcaaggtggccatcctgaggtac
attgagtgcctggcccgtcgaatggaccccgcagactttgtcaactccagcgagacacgc
ctggccgtctcccgcatcatcacctggaccacggaaccaaagagctccgacgtccggaag
gcggcccaggtggttctgatcgccttgttcgagctgaacaccccagagttcaccatgctg
ctgggggccctgcccaagaccttccaggacggagccactaaactgctgcatagccacctg
cggaactccagcaacaccggcgtggcttctcccagtagcaccatgggacggacgcctccc
ctacctcgccaccccagcagtcgcagcagccccctcacctctcccaccaactgctcccat
gcgggggggctctctcccagtcggctatggggttggagtgctgatggcctgtcaaagtac
ccccctcccttcccttctctctcctccacccctgctgccccctccctgaagaccctacga
agtgcttactctcccagcatgttggagtacgacacagagaacctgaacaccgatcagatc
tatagctccctgcgaggcgtcactgaggccatccagaacttcagcttccgcagtcaggag
gacctcatggagccgggcagagtcaagagagaggacacgccgggtgttggaacagcatca
cactctggtgttgacgtggtggaggggcccgggggtcgcacggccctggacaacaagacc
tccctactcaacaccccctccccgcgttccttctccgggccccggggccgcgactacaac
ccctacaactacacagacaccatcagcgcctacgacaaggctgccctgagagagacggtg
tacgaggacgacgtggagcagcttcgagatggccgccaagagtgtggtggagaaaacaag
atgctgcacaccaagaacagttcccctgcggaacagctggaactggcgggcgagctgctg
aaggagctgtctaaccccagtgagaggccagaggagaggaggggagccctggtggagctg
ctgaagatagcccgggaggacagcctggcagtgtgggaggaacacttcaaaaccatgctg
ctcctgctgctggagaccctgtcggatcaagatcacaccatccgggccctggcactacga
gtgctgaaggagatcttacgtaaccagccggcacgcttcaagaactatgcagaactcacc
atcatgaagactctggaggcacacaaagactcccacaaagaggttgtgcgggcagcagag
gagtcagcctccaccctggctggctccatccacccagaacagtgtatcaaggtgctgtgt
cccatcgtccagacagctgactaccctatcaacctggcttccatcaagatgcagaccaag
gtgatagaacgcatcaccaaggagtccctccaccagctgctgcctgacatcataccagga
ctactgcaggggtatgacaacacagagagcagtgtgaggaaggccagtgtgttctgtctg
gtggctgtctactctgtcatcggtgaagagttgaagccctacctggcccagctcacagga
agcaagatgaagctgctgaacttgtacataaagagagcccagacgtccaccagcaacagc
agcagctcttcagacatctcctcatactaa
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integrated database retrieval system
