Salvelinus fontinalis (brook trout): 129859703
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Entry
129859703 CDS
T11136
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129859703
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129859703
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129859703
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
129859703
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
129859703
NCBI-ProteinID:
XP_055785762
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All DBs
Position
7:54100079..54108596
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AA seq
751 aa
AA seq
DB search
MSSPMLLLPLLLFLGLRVINAAAETRRPCRDLLPLDLLSRVLSRAGEGARGVTGGGVHLI
QSGGVRGVRLSHPHPSLDFPSSQHLVNCHLFPREFSIVTTLKVSLVAPKKNEYIFSVVEE
KEEEDARIGKRKGETQGGTDGDWYSEKDGEQGGRDDESDEERDGETDGGGERLMDGEKRK
GSRDGENSNSQGRLLIGLWFSRDGLHFLFRGRSGGVMARWVFRGIQLADDRWHTLVLAFS
GHYATLTVDCNTHLELRVHSKSLPSDLSVQGSRFHIGSRGRRNGLFSGLIRQLVLVPGSD
ATPRVCPSSNPGLAELSVPAVLLDQPQKETRSDLTLPSYESEVRVSVGLEKSCSSSVRGQ
LWFNPVRKALYLCDGTLWVPMLQESHRLDYVLEQQVLSTSSETYDIEVFSVQGLGLMAAM
AHRSPSLGSAVYLWRDGGFHLYQKISTHGALSWRHFTKGKKIFLVVSNSRESTGNEETVV
KDELSVIYKWNKKTQRFVYYQALQTHCARDWEAFRIQGHTYLAVANHRQGNTNHTIDSMV
YKWDRGTQLFEPHQALRTSGAYDWEAFTVGPYHFLAVANAFDGQTTHVDSVIYVWVDGSF
RLFQTIKTFCATDWEMFQIGSRVFLVVANGHQLHGNGPGRYAINSTIYELDMSSQLFLRF
QDIVTYSAVDWEFFTVGEESYLVVANSFDGESHSLNSIIYRWQGYEGFVPIHRLPTIGCS
DWEFFTSGEESYLIYSSATAPLSKVFRLKTH
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccgatgctgctgttgcctctgctgctgtttctcgggttaagggtcatcaac
gcagctgcagagacacggagaccatgtagagacctgctccccctggaccttctgtcccgt
gttctctccagggcaggggagggggcgaggggggtaacaggagggggggtgcatctgatc
cagtctgggggtgtgaggggtgtccgtctgtcccatcctcacccttccttggacttcccg
tcctcccagcacctcgtcaactgtcacctcttccccagagagttctctatcgtcaccacc
ctgaaggtcagcctcgtcgcccctaagaaaaacgagtacatattttctgtggtggaggaa
aaggaagaagaggacgcaaggattggaaagaggaagggggagacacagggaggaactgat
ggagattggtacagcgagaaggatggagaacaaggagggagggatgatgagagtgatgaa
gagcgggatggagagacagatggagggggagaaagactaatggacggagagaagaggaag
ggaagtagagatggagagaacagcaacagtcagggacggcttctgattggcctgtggttc
tccagagacggactccacttcctgttcagaggtcgcagcgggggggtcatggcgcgctgg
gttttccgaggcatccaattggctgatgatcgctggcacacgttggttttagcatttagc
ggacactacgctactctcactgtggactgcaacacacacctggaactcagggttcactcc
aagtcgttgccctctgacctcagtgttcaaggttccagattccacatcggcagccgaggg
agacggaatggcctgttctcaggtctgatcagacagctggtcctggtaccaggctctgat
gccacccctcgtgtctgcccgtcttccaaccccgggctggcagagctgtctgtgcccgcg
gtactgctagaccaaccacaaaaagagactaggagtgacctcacgctgccttcatatgag
tcagaggtgcgggtgtctgtggggctggagaagtcctgttccagttcagtaagaggacag
ctgtggttcaaccccgtcaggaaagctctctacctctgtgacggtacactctgggtcccc
atgctgcaagagtcccacagactagactatgtcttggagcagcaggtcctctccaccagt
tcagagacgtatgatatcgaggtgttcagtgtacaagggctgggtttgatggcagcaatg
gctcaccgctccccctccctgggctctgcagtctacctctggagagatggaggctttcac
ctttaccagaagatcagcacacatggagctctctcctggagacactttactaaggggaag
aagatattcctggtggtgtctaactccagggagagcacagggaatgaggagacagtggtg
aaagatgaactgtcagtgatctacaagtggaataaaaagacacagaggtttgtttattac
caggcgctccagacacactgtgcacgggactgggaggccttccgcatccaaggacacacc
tacctcgccgtggccaaccacagacaaggtaataccaaccacaccatagacagtatggtc
tacaagtgggaccgtggtacgcagctgtttgaaccacaccaggccctgcggacctctggg
gcttacgactgggaggccttcacggtcggaccctaccacttcctggctgtggcgaacgcg
ttcgatggacagaccactcacgttgactcggtcatctatgtctgggtggatggaagtttc
cgcttgtttcagactattaagacattctgtgccacagattgggagatgttccagatcggc
agcagggtcttcctggtggttgctaacggacaccaactccatggcaacggccccggtcgc
tatgccatcaactcgaccatctacgagctggacatgagctctcagctgttcctgcgtttt
caggacatagtcacatacagtgctgttgactgggagttcttcacagtaggagaggagagt
tacctggttgttgcaaactcctttgatggagagtctcactctctgaacagcattatctac
aggtggcagggatacgaggggtttgttcccattcaccggcttcccaccatcggatgcagc
gactgggaattctttacttccggagaggagtcctatctgatctactccagcgccacagca
cctctctccaaagtcttccgtctgaaaacacactga
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