Salvelinus fontinalis (brook trout): 129859827
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Entry
129859827 CDS
T11136
Name
(RefSeq) transcription factor Sox-1b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129859827
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129859827
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129859827
NCBI-ProteinID:
XP_055785955
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All DBs
Position
7:57363336..57366657
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AA seq
339 aa
AA seq
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MYSMMMETDLHSPVPQTNTNSGHTGGSNNGNKVNQDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKD
KYSLAGGLLTGTGGGGVGLGMSPGVGQRLDSPGGHGGASAASYAHMNGWTNGAYSGQVAA
AAAAAAMMQEAQLAYSQHPGSGHHHHSHHHHHPHNPQPMHRYDMSALQYSPISNSQSYMS
ASPSGYGGITYTQHQSSGVASSGSMGTLGSLVKSEPSVSPPVSTHSRAPCPGDLRDMISM
YLPTGEAAGDPSVQSRLHALPQHYQSSTTGYLKKRTTLW
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatgatggagactgacctacactccccagtgccccaaacgaacacgaat
tcggggcacacgggaggatcaaacaatgggaacaaagtcaaccaagaccgcgtaaagaga
ccgatgaatgccttcatggtttggtcccggggccagcggcggaagatggctcaggagaac
cccaaaatgcacaactccgagatcagcaagcggctcggcgccgagtggaaggtgatgtcc
gaggcggagaagagacccttcatcgacgaggcgaagcggctacgagctatgcacatgaag
gagcatccggattataaatacagaccgagacggaagaccaagacactgttaaaaaaggac
aaatactctttggccggtgggctgcttaccgggacagggggtgggggtgtcggtctaggg
atgagccctggggtcggacagaggttagacagtcccgggggtcacggcggtgcgtctgct
gccagctacgcgcacatgaacggctggacgaacggtgcgtactcggggcaggtggctgca
gctgcggcggccgcggccatgatgcaggaggctcagctcgcctacagccagcacccgggc
agcgggcaccaccaccactcacaccaccaccaccacccgcacaacccccagcccatgcac
cgctacgacatgtcggccctccagtacagccccatctcgaactctcaaagctacatgagc
gcctctccgtccggctacggcgggatcacctacacgcagcaccagagctctggtgtcgcc
tcgtccgggtcgatgggcacgctgggctctctggtgaaatcggaaccgagtgtgagccct
cccgtctctactcactcgcgcgccccgtgtcccggggacttgagggacatgataagcatg
tatttaccgacgggggaagctgcaggtgacccgtccgttcaaagtagacttcacgcgctg
ccgcagcactaccagagctccacgacagggtacctaaagaaaaggacgacgttgtggtag
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