Salvelinus fontinalis (brook trout): 129859858
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Entry
129859858 CDS
T11136
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129859858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129859858
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
129859858
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
129859858
NCBI-ProteinID:
XP_055786015
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All DBs
Position
7:58154241..58197128
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AA seq
477 aa
AA seq
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MASNSIFESMSSYQPCFIRDPAPGRRFTPPSTTLLSGKMSEGLPLGAQESSSAALVGKLR
IADRGMVEVLSDHPGELMRTDSPNFICSVLPTHWRCNKTLPIAFKVVAFGDIPDGTLVTV
MAGNDENYSAELRNATAALKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRA
IKITVDGPREPRRHRQKLEDVKTGALAFSERLSELEQLRRSSMRVTPPHHHHHHAPTPNP
RPALNPAQFSNPTHHTQIPDSRQMQTSPSWSYEQSYPYLGQITTPTVHSTTPISPSRSSL
SDLSSRLSGPDLTAFSDPRMSLDRPFSSLGSLPDSRYSDPRMHYPTGAFTYTPTPVSNGA
IGLTMATTPAGRYHTYLPPPYPTNAPQGQGGPFQAGSSPYHLYYSTAAGSYQFSMMAGGG
GERSPPRIFPPCTNASTGSSLLHPSLPNQSEGVGVEAEGSHSSSPTNMVPEAVWRPY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaacagcatctttgaatccatgtcatcctaccagccatgcttcatcagggac
ccagcacctggtcggcgcttcacccccccttccaccaccctattgtcaggtaagatgagt
gagggtctgcccctgggtgcccaggagagcagtagcgccgccctggtgggaaagctgcgt
attgcagaccgaggcatggtggaggtgctgtcagatcaccctggagaactgatgaggaca
gacagccccaacttcatctgttctgtcctacccacacactggaggtgcaacaagacgctg
cccatcgcattcaaggtggttgcctttggtgatatccctgacggtaccttggtcacggtg
atggcagggaacgatgagaactactcagcagagctccgcaacgccacggccgccctcaaa
aaccaggtggctcgcttcaacgacctgcgcttcgtaggccgcagcggacgagggaagagt
ttcactctgaccatcacggtgttcaccaaccctccccaggtggccacctaccagagagct
atcaagatcaccgtggacgggcccagagaaccacgccgccacagacagaagctggaggat
gtgaagacgggagcattggccttctccgagcgtctgagtgagctggagcagctaaggcgg
agctccatgagggtcacgccccctcaccatcatcaccaccacgcccccactcccaatccc
cggcccgccctgaacccggcccagttcagcaaccccacacaccacacacagataccagac
tctaggcagatgcagacatctccgtcgtggtcctatgagcagtcctacccctacctgggt
cagataaccacgcccaccgtccactcaaccacgcccatctcacccagccgctcctccctc
agtgacctgtccagccgcctctcaggccctgacctcacagccttcagcgacccccgtatg
tccctggatcgcccgttctcctcactgggctcgctccctgacagccgctactctgaccca
cgcatgcactaccctactggggccttcacatacacccctacccctgtatccaatggcgcc
atcggactcaccatggcaaccacccctgctgggcgctaccacacctacctccccccaccc
taccccacaaacgccccccagggccaaggtggaccattccaggccggttcctctccctac
cacctgtattatagcacggccgctgggtcctaccaattctccatgatggcggggggaggc
ggagagcggtctcctccgaggatattccctccctgcaccaacgcatccacaggctcctcc
cttctgcacccgtctctgccaaatcagagcgaaggggtgggggtggaagcggagggaagt
cacagtagctcccctaccaatatggtacccgaggccgtatggcggccatattga
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