Salvelinus fontinalis (brook trout): 129859942
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Entry
129859942 CDS
T11136
Name
(RefSeq) BCL-6 corepressor-like isoform X1
KO
K23215
bcl-6 corepressor
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129859942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129859942
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129859942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
129859942
NCBI-ProteinID:
XP_055786178
LinkDB
All DBs
Position
7:complement(60173311..60291666)
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AA seq
2187 aa
AA seq
DB search
MVDASAACRMNPLAALGMDRSSLMRESLRVHGGMVYPGIRTLSASQKAREGVSSLPLGYD
LVYKPEGLTLEGRKPGNGYVGLYKSSPPGLQRPGGGGEGLGMERRVGPGDKPSELGLSGS
NGFLRLPWAVNPYADPGLYPFLDSSKYAALNMYKASFLSQPSPYLPQHLAYQSLCGGAGG
SAAGAERLFYMPTYPPAPISSPLAPPMRIPMATVVPNTLSPIQGLGPRIHHEASTYGSQL
HQQHQAHQQSQPHHQSHSDRQPQSQPHHQSHSDRQPQSQPHHQSHSDRQPQSQPHHQSHS
DRQPQSQPHHQSHSDRQPQSQPHHQSHSDRQPQSQPHHQSHSDRQPQSQPHHQSHSRDRQ
PQSQPHHQSHSRDRQPQSQPHHQSHSDRQPQSQPQSHSDRQPQSQPQSHSDRQPQSQPQS
HSDRQPQSQPQSHSDRQPQSQPQSHSDRQHNNSSSSKSSRTSSSKSSGSTIIHNSSSITS
SSSAGTGISSSLPVDSTQALIMQSPRTAPHPPQTSVSPPAPLIDNSTLDIQKSLFRSPPC
STTTTTSSSPSVSHPFYMSSIASEHRSPVRSGSNTHKAKPKELGSSSEHRNVERNGERKR
SQSPLKTLSSDRPAVLQAPAKDPADKPLDLSARILELEGSPNGFPPKLEALAKLGYSPAA
RYGLPPSRELLKETLSPSGASSKTPERPEIISTLRSSWVVPSPTPVHDSSSSDANHNKDP
SVIKHKNLENLSSPQQRSSSCPRIGEVDGAVVPSHAPAVVAPSGSRPSSASPSPKVNGDW
PRSSPNYSETAPSSNRVGSHPSSGKPLKPLKKPEAQEMPFKPQQPPHLDNGHPSGHPPSH
LYLPQSDGYLPPSLAYANRYLPYSVQESMSLPHMPMPGKGPVYPHPVLLGSSSLYPPRLP
PKHGLPYGIPPSHGDYLTFHDSQEMVHPLMSSPHTGLDLKTSERLQELRSRPKEKIWQHH
EDSAPAYKSQTQAPDTKHTRRVDRETDRSTGLGSKSLNHNPLTGAREEIVCIDLIQDDGD
SDSPLTKAVSPCAKRGDPSKPVGSGSIGRNEGREAELQHMLRTGQAVELRPGQAHRQAEQ
QQRSQLWLGFHPSSLRPEPPALSPCPFPRHGEDSPSPAESSPISDLPEEQTLRCARTSGD
RTSWDRRDQSLEGLKSRDCTFEDPTSVDRSSGDHSFWDHTHEDCTFKDRSSWDRTRVDRT
CRVRSCEDRTSADHSPRERTLNESGFRNERTMDHYSDLDKDMHTDTESHEGEEYDDQGCP
RARRSSLAKRIANSSGYVGDRIKCVTTELYADSSKLSREQRALQMEGLTQEDSKLSQPAA
YCERAMLRFSELELKEKEGGGGAAVDLADSQRERREGDGDGGEDRARCQGPARTGPGASA
LTDEAEKDGVQLTCPNNRVPVLQRCPHTEGLPPREREQAGPDLEERKRGMMMEKEERVCV
LPREWSASLPTAPVERLAQKDANPGIMPTMPTTVPSRKHAYALEPCQPLQADSQGKEREE
NEREEETMDVPAKRARLTNGPTEPVPEELKNLKVCIELTGLRLSKPRLAQELSQWQAATQ
RSTEVNGSMAMTTALPDGCPEVGVTDRKVASQEDRSLKRRSEVNGHAWCHEAFGHGDIER
VVLPSVPLTPAHRDRLSRTPSNTPVRKPPLQTTTPALTPFHSLAPAHPHITLTPSPPRLS
DKRQRLKEHRRTSALGLGPPHTGPHPDHDPNPTGDLVAPRLRRHGDQDKPKGKRQCKTKH
TSQREREREGLGPGNEELRDERERERPGPGNEELREERERERLGPGNEELREERERERPG
PGNEELRDERENKVKEKRCSEKRRRSSSLSDYSSPAPPLTPPPQLSPLPSPTETQDRTPT
PSNPPLPTSTPTSRPMPPEARRLIVNKNAGETLLQRASRLGYEDVVLYCLENRVCDVNHR
DNAGYCALHEACARGWLAITQHLLEHGADVNCSAQEGTRPLHDAVENDHLEVVRLLLSYG
ADPTLATYSGRSLLRMTHSHGMEGFLSEYFSDLKGREDTDEGIYWEFYGSAVCESGEDPA
AYDILANPPGPGEEEEEDTRQGFEFEFSDRPLLPCYNIQLSLSQGPRNWLLLSDVLKRLR
MSSRAFRAAFAHLEVATIAEAEFYKQASLSQLFSCPDELATFLPDSKELLDLVETSSELA
ALLGSSLECLDSRWEPKGARVKAKARS
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcgagtgctgcttgcagaatgaacccgctagctgccctgggcatggaccgt
agcagcctgatgagggagagcctccgcgtccacggagggatggtctacccgggcatccgc
accctgtccgcctcccaaaaagccagagagggggtctcctccttgcccctgggctacgac
cttgtctacaaacccgaagggttaaccttggaaggcaggaagcctggtaacggttacgtg
ggtctgtataagagctctccccccgggttgcagaggcctggtggaggaggggagggcctg
gggatggagcggcgtgtggggcctggagataagccctctgagctgggcctcagcggcagc
aacggcttcctgcgactgccctgggcagtaaacccgtacgctgaccccggactgtacccc
ttcctggactcctccaaatacgcagccctcaacatgtacaaggcctcgttcctgtcccag
ccctcaccctacctgccccagcacctggcctaccagtccctgtgtggaggggcggggggt
agcgctgctggggcagagcgcctcttctacatgcccacgtaccccccggcccccatctcc
tcccccctggcccctcctatgaggatccccatggccacggtggtccccaacaccctctcc
ccgatccagggcctggggccccggatccaccacgaggcctccacctacgggtcccagctt
caccagcagcaccaggcccaccagcagtcccaaccccatcaccagtcacatagtgacagg
cagccccagtcccaaccccatcaccagtcacatagtgacaggcagccccagtcccaaccc
catcaccagtcacatagtgacaggcagccccagtcccaaccccatcaccagtcacatagt
gacaggcagccccagtcccaaccccatcaccaatcacatagtgacaggcagccccagtcc
caaccccatcaccagtcacatagtgacaggcagccccagtcccaaccccatcaccagtca
catagtgacaggcagccccagtcccaaccccatcaccaatcacacagtagagacaggcag
ccccagtcccaaccccatcaccaatcacacagtagagacaggcagccccagtcccaaccc
catcaccagtcccatagtgacaggcagccccagtcccaaccccagtcccatagtgacagg
cagccccagtcccaaccccagtcccatagtgacaggcagccccagtcccaaccccagtcc
catagtgacaggcagccccagtcccaaccccagtcccatagtgacaggcagccccagtcc
caaccccagtcccatagtgacaggcagcacaacaacagcagcagtagtaagtccagtcgg
acttcctctagtaagagctctggcagcaccatcattcacaacagtagcagtattaccagt
agtagcagtgctggaactggcattagcagcagcctaccagtggactccacccaagcactt
ataatgcagtccccccgcacagccccccaccccccccagacctcagtctctccccccgct
cctctcatagacaacagcactttggacatccagaagtcactgttcagaagccccccctgc
tccaccaccaccaccacctcttcctccccgtcggtgtcccatcctttctacatgagcagc
atagcctctgagcaccgctccccggtgcgatccggcagcaacacccacaaagccaaaccc
aaagagctgggcagcagctcagagcacaggaatgtggagaggaatggggaaaggaagcgg
agccagtcccctttaaagactttgtcctctgatagaccagcagtactacaggctcctgcc
aaagaccctgcggacaagcctctggatctgtcagccagaatcctggagttggaaggctcc
cccaacggattccccccaaaactagaggccttggctaagctgggctactcgcccgcggct
cgatacggcttaccccccagccgggagctcctcaaagagactctctccccgtcaggggct
tcctccaaaacccctgagaggcctgagatcattagcactttacggtcctcctgggtggtg
cccagcccgaccccggttcacgacagctccagctcagacgccaaccacaacaaagacccc
tccgtcatcaaacataaaaacctggagaacttgtcttcgccgcagcagcgaagctcttcc
tgtcccaggataggtgaggtcgatggggctgtcgtccccagccatgccccagctgtggta
gccccttctgggagccgaccgtcctctgcctccccgtctcccaaggtcaacggtgattgg
ccaagatcctcccccaactactctgagacagccccttcttccaacagagtgggcagccat
ccctcttctgggaagccattgaaacccctcaagaaaccagaggctcaggagatgcccttc
aaaccccagcagccgccccacttagacaacggccatccgtccggccacccccccagccac
ctctacctcccccagagtgacggctatctgccccctagcctagcctacgctaacagatac
ctgccctactcggtccaggagagcatgtccctgccccacatgcccatgccaggcaaaggc
ccagtgtacccccaccctgttctgctgggcagcagcagcttgtacccaccccgcctgccc
cccaagcacggcctcccgtacggcatcccccccagccacggggactacctgaccttccat
gactcccaggagatggtccaccccctcatgtcctccccccacacaggcctggacctcaag
accagcgagcggctgcaggagctcaggtccaggcccaaggagaagatttggcagcaccac
gaggactctgccccggcctacaagagccagacccaggccccagacactaaacacacccgc
agggtggacagagagaccgacaggtccacaggcctgggctcaaagagcctcaaccacaat
cccctgacgggagctagagaggagatagtctgtatcgacttaatccaagacgatggggac
agcgactctcccctgaccaaagctgtctctccatgcgctaagagaggagacccttccaaa
ccagtgggtagtgggagtatcgggagaaatgaggggagagaagcagagcttcagcacatg
ctccgtaccggccaggctgttgaactcaggccaggccaggcccacaggcaggcagagcag
cagcaacgcagccagctgtggctgggcttccacccttcctccctccgtcctgagccccca
gccctctccccctgcccctttcccagacatggggaggacagccccagccctgcagagagc
agccccatctctgacctgccagaagagcagacccttcgctgcgcaaggacttctggagac
cgcacctcttgggaccgtagagaccaatctttagagggccttaagagcagggactgtacc
tttgaggatcccacctctgtggaccgtagttctggggaccacagtttctgggaccatacg
catgaggactgtacttttaaggaccgcagctcttgggaccgtacacgtgtggatcgtaca
tgtagggtccgctcttgcgaggaccgcacctccgcagaccactctcctagggaacgcacc
ttgaacgaatctgggtttaggaatgaaaggaccatggaccactactcggacctggacaaa
gacatgcacacggacacagagtcccacgagggtgaggagtacgacgaccaaggctgcccc
agggccaggaggtccagcctggccaagcgcatcgcaaactcctctggctacgttggtgac
cgcatcaagtgtgtcaccaccgagctgtacgccgactccagcaagctgagcagagagcag
cgggcactgcagatggaaggcttaacacaagaggacagtaaattaagtcaacctgctgct
tactgtgagcgtgctatgctgcgcttctctgagctggaactgaaggagaaggagggagga
ggaggggctgcggtggacttggcagacagccagcgcgagcggagagagggggatggagat
ggaggagaggacagggcgcgctgccaaggcccagccagaacggggccaggggcctcagcc
ctcacagacgaggctgagaaggacggtgtgcagctgacgtgccccaacaatagagtgcct
gttctccagcgatgcccacacaccgagggcctcccacccagagagagggagcaggctggc
cccgacctggaggagaggaagagggggatgatgatggagaaagaggagagggtgtgtgtg
ctcccacgggagtggtctgccagcctgcccacggccccagtggaaaggctggcccagaag
gatgccaaccctggcatcatgcccaccatgcccaccacggtgcctagcaggaaacacgca
tatgccctggaaccgtgccagccactccaggccgacagccaggggaaagagcgggaggaa
aatgagagagaagaggagacgatggatgttccagccaaaagagccaggctaacaaacggc
cccactgagcccgtcccagaggaactaaagaacctcaaggtgtgtatcgagctgaccggc
ctccgactcagcaagccccgcctcgcccaggagctcagccaatggcaggccgccacccag
aggtcgacagaggtcaacggaagcatggccatgacgacggccctgcccgacgggtgcccc
gaggttggcgtcacagacaggaaggttgcctcacaggaagaccggagcctgaaacgcagg
tcagaggtcaacggccacgcctggtgccatgaagcgtttggtcacggcgacatcgagcga
gtggtgctgccgtctgttcctctgaccccagcgcatcgggaccgcctctcccggaccccg
tccaacacccctgtcagaaaaccacccctgcagaccaccacccctgccctcacccccttt
cactccctggcccctgcacacccccacatcaccctcacccccagccctccacggctgtca
gacaagagacagaggctaaaagaacaccgcaggaccagcgctttgggactgggacccccc
cacaccggccctcaccccgaccatgaccccaacccaacgggggacctggtggcccccaga
ctccgtcggcacggcgaccaggacaagcccaagggcaagcggcagtgcaagactaaacac
accagccagagggagagggagagagaggggctggggccggggaatgaagaactgagggat
gagagggagagagagaggccggggccggggaatgaagaactgagggaagagagggagaga
gagaggctggggccggggaatgaagaactgagggaagagagggagagagagaggccgggg
ccggggaatgaagaactgagggatgagagggagaataaggtcaaggaaaagcgatgcagc
gagaagcggaggaggtcttcatccctgtcggattactcctcccctgccccccctctcaca
ccgcccccccagctcagccctctgcccagccctacagagacccaggaccgcacgccaacc
ccctccaaccccccgctgcccacctctacccctaccagccgacccatgcctcccgaggcc
cgcaggctcatcgtcaacaagaacgcaggagagaccctgctccagagggcttcccgccta
ggatacgaggatgtagtgctgtactgcctggagaacagggtgtgtgacgtcaatcaccgt
gacaacgcaggctactgtgcgctgcacgaggcatgtgcacgtggctggcttgctatcact
cagcacctgctggagcacggtgccgacgtcaactgtagcgcccaggaaggcaccaggccc
ctccatgacgcggtggagaatgaccatctggaagtggtccgtctgctactgtcctacgga
gctgacccaaccctggctacatactctggccgcagcctcctccgcatgacgcactcccac
ggcatggagggattcctctctgagtatttttccgacctgaaggggcgtgaagacactgac
gaaggcatctactgggagttttacggcagcgccgtgtgtgagtcaggtgaggacccagca
gcctatgacatcctggccaaccctccaggcccaggagaggaggaggaggaggacacgagg
cagggctttgagtttgagttctctgaccgacccctcctgccctgctacaacattcaactc
tccctctcacagggtcccagaaactggctgctcctatcagacgtcctgaagagactcaga
atgtcctccagggcgttcagggcagctttcgcccatctggaggtagcaaccatcgccgag
gcagagttctacaagcaggcgtcactgtcgcagctcttctcgtgccccgacgagctcgcc
accttcctccccgacagcaaggagctgctggacctggttgagaccagctcggagctggct
gcgctgctcggctcctcgctagagtgtttggacagccgatgggagcccaaaggggcccgg
gtcaaagctaaagcccgctcgtga
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