Salvelinus fontinalis (brook trout): 129860137
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Entry
129860137 CDS
T11136
Name
(RefSeq) cullin-4A-like isoform X1
KO
K10609
cullin 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03420
Nucleotide excision repair
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129860137
09124 Replication and repair
03420 Nucleotide excision repair
129860137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129860137
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129860137
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129860137
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
129860137
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129860137
TCR (transcription coupled repair) factors
Cul4-CSA complex
129860137
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129860137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
129860137
NCBI-ProteinID:
XP_055786448
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All DBs
Position
7:complement(63821876..63844134)
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AA seq
757 aa
AA seq
DB search
MAEDIRQDKKANFSALTEHNNNGVTKISGLASNKTGASKKLVIKNFKDRPKLADNYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRNHI
VSDGAVQKRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETNRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILLDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEEMERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQFKQYTQNQNEPSQLELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIKSATGIEEGELRRTLQSLACGKARVLNKTPRGKDIEDGDRFNFNNDFRH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLGHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacatacgacaggacaagaaagcaaacttctctgctctgacggagcacaac
aacaacggagtgacgaagatttctggcctggcctccaacaaaactggcgcctccaagaaa
ttagttataaaaaatttcaaagacaggccaaagctagcggacaactacactgaggacacc
tggctgaagctgagggatgcggtaggagccatccagaacagcacctccatcaagtacaac
ctagaggaactctaccaggcggtggagaacctgtgttcctataaagtatcccccacactg
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacatcagttcaga
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgctggcaggaccac
tgcagacagacgatcatgatccggagtatctttctgttcctggatcgtacctacgtgctc
cagaactccctgctcccctccatctgggataccgggctggaactcttccggaaccacatc
gtgagcgacggggctgtccagaagcgcacggtcgatgggatcctggaacagatcgaacgt
gaacgcaacggagagaccgtggaccgcagccttctccgcagcctactgggcatgctctca
gatcttcaggtgtataaagagtcgtttgaggagcgttttttgatggagactaacagactg
tacgctgcagagggacagaggctgatgcaggaacgagatgtgccggagtacctgcatcat
gtggctcgtcggttggaagaagagaacgatcgtgtcatcagctatcttgaccagagcact
cagaagccacttatctctaatgtagagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctgttagacggtaaccgggtgatggagctggctctgctc
taccagctcttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccagagaaggataaggacatggtt
caagacctgttggacttcaaggataagatggacaacgtggcccagggctgtttcaacaga
aacgagagcttcatcaacgctatgaaggaggcctttgaagctttcatcaacaacagaccc
aacaaacctgctgaactcatcgcgaagtacgtggactgtaaattgcgggcgggcaacaag
gaagctaccgaggaggagatggagagaattctagacaagatcatgatcatcttccgcttc
atccacgggaaggatgtgttcgaggccttttataagaaggacctggccaaacgcctgctg
gtggggaagagtgcctccgtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgttatgatccagttcaaacagtacacccagaaccagaatgagcccagccagctggag
ctgacggtcaacatcctcaccatgggctactggccctcctacactcctatggaggtccac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccacgctgttctaaagactgagttt
aaagagggtaagaaggagctgcaggtgtctctgttccagacgttggtgcttctgatgttc
aacgagggggaggagttcagcgtggaggagatcaaatcagccactggcatagaggagggt
gagttgaggcgtaccctgcagtctctggcctgtgggaaggcgcgcgtcctcaataagact
ccccgggggaaggacatcgaagacggagaccgcttcaacttcaacaacgacttcagacac
aaactgttccgcatcaagatcaaccagattcagatgaaggaaacggttgaggagcaggtg
agcaccactgagcgtgtgtttcaggacagacagtaccagatcgacgcggccgttgtccgc
atcatgaagatgaggaagaccctgggccacaacctgttggtgtcagaactctacaaccag
ctcaagttccctgtcaagcctggagacctgaagaagcggattgagtcgctgatcgacaga
gactacatggagagagacaaggagagtcccaaccagtaccactatgtggcctga
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integrated database retrieval system
