Salvelinus fontinalis (brook trout): 129860506
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Entry
129860506 CDS
T11136
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129860506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129860506
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129860506
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
Neur_chan_memb
GPHH
HB_ELP1
Dynamin-like_hel_bact
Motif
Other DBs
NCBI-GeneID:
129860506
NCBI-ProteinID:
XP_055786911
LinkDB
All DBs
Position
8:9874724..9962925
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AA seq
1976 aa
AA seq
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MAAPLMAPPGPDSFKYFTAESLANIELRINEEKNKPPPKQDSSHRDDDDDNKPKPNSDLE
AGRNLPFIYGDIPSGMVATPLEDLDPFYQAQKTFIVLNRGKTIFRFSANPALYIISPFNL
FRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKIVAR
GFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTENYLANGSKGF
DWNEYINNDTNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAEQKEAEFKAMLEQIKNQQEAAQANAMATSAGTVSEDVAEDDGGGNLSCSSSEMSK
LSSKSAKERRNRKKKWRQKEQSQREEKGDCEKFVKSESDDGSKRSRFRFPDNRLGRKSSI
MNQSLLSIPGSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRDSLFSP
YRRSSYTGYHHGGGKRNSTVDCNGVVSLISPGTGGRLLPEVKIDKASADDSDLLQDLKPT
TEVEVKKKLSGSLMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRSCPPCWYKFS
NIFLIWECCPIWLKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFEEVLSV
GNLVFTGIFAVEMFAKLVAMDPYYYFQEGWNCFDGFIVTLSLVELALADVEGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCK
IALDCKLPRWHMHDFFHSFLMVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLV
VLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWFKITLAELVLSLTKKPP
VEDEQKPLDDMYNKKLNCIANHSGVDINRDLDYTKNGNGTTSGIGSSVGKYMIDEDHMSF
IHNPNLTVCVPIAVGESDFENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVEVEA
VVVEAVEEYLDPENCWTPECIIKYPCCDVPITHGWGKYWWFLRKTCYLIVEHNWFETVII
FMILLSSGALAFEDVYIQQRKTIRTILEYADSVFTYIFILEMLLKWVAYGFHKYFTNAWC
WLDFFIVDVSIISLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIP
SIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNQTSEDNFLATEVNNKTQCLALINQNFT
EVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAIDSRRVEDQPIYEDNLYMYIYFV
IFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIP
RPQNYIQGLVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSDETENILYWVNFIFIVAF
TIEFVLKLFALRHYYFTNGWNVFDTVVVILSIAGMFLADIIEKYFVSPTLFRVIRLARIG
RILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDM
YNFETFGNSMICLFMITTSAGWDGLLLPILNYPPDCDPTMENPGAPSTGNCGNPSVGIFF
FVMYIIISFLVVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPSASQFITF
QKLGDFADTLEHPFRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDML
RTQMEERFVAANPSKVSYEPITSTLRRRQEDVSARCIQKAYRAHLLKRGFICKRRPKTKL
ENGGTNNEEKKESTPSTASLPSYDSVTKPDKEKQEENEGERKEKDRNQKDERESKC
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttatggcaccaccaggacctgacagcttcaagtattttaccgcggaa
tcattggctaacatcgagctccggatcaacgaggagaagaacaaaccgccgcccaagcag
gacagcagtcaccgcgacgacgacgatgacaataaacccaagcccaacagcgacctggag
gctgggcggaatctgcccttcatctatggcgacatccctagtggaatggtggcgacacca
ctggaggatttggaccccttttaccaggctcagaaaacattcatagtgctaaacagaggg
aagactatcttccgctttagtgccaaccctgccttgtacatcataagtccttttaatctt
ttcaggcgaatagctataaaaattttgatacattctcttttcagcatgatcattatgtgt
actattttgaccaactgtatattcatgacttttagtgatcctcctgagtggtccaaacaa
gtagagtacacgttcacagggatttatacgtttgaatctcttgtaaaaattgtcgctcga
ggattctgtatagatgggtttacattcctaagggatccatggaactggctggatttcatg
gtcatttctatggcatatataacagagtttgtggacctgggcaatgtctctgcgctgaga
acattcagagttctccgagcattgaaaactatctctgtcataccaggcctgaagaccatt
gtcggtgctctaatccaatctgtgaagaaattgtcagacgttatgatcctcacggtcttc
tgtctcagtgtcttcgctctgattggactacagctcttcatgggcaacctacggcaaaaa
tgcgtgatttggccaatcaactccaccgagaactacttggccaacggcagcaaaggcttc
gactggaatgaatacatcaataacgacaccaatttctacttcctgcctggacaattggat
gcccttttatgtggcaacagctcagattctggccgctgccccgagggctacacatgcatg
aaagctgggaggaatccaaactacggttacaccagcttcgatagctttggatgggctttc
ctggctctcttcagactcatgacacaggacttctgggagaacctctacatgctgaccctg
cgggcagcagggaagacctacatgatcttctttgtgctggtgattttcgtggggtccttc
tacctggtcaatctgatcctggctgtggtggccatggcctatgaggagcagaaccaggcc
accatggaggaggccgagcaaaaagaggctgagttcaaagccatgctggagcagatcaag
aaccagcaagaggctgcacaggccaacgccatggcgacgtcggcaggcacggtgtcggag
gacgtagcggaggacgacggtggggggaacctgtcctgtagctcgtcagagatgtccaag
ctcagctccaagagcgccaaagagcggcgcaaccgcaagaagaagtggcgccagaaagag
cagtcgcagcgggaggagaagggggactgcgagaagtttgtcaaatccgagtcagacgac
ggcagcaagaggagccgcttccgtttccctgacaaccggttgggtcgaaagtcttccatc
atgaaccagtccctcctcagtatcccaggctcgccgttcctgtcgaggcacaacagcaag
agcagcatcttcagcttcaagggccgcggcaaggacgtgggctcggagaacgagttcgcc
gatgacgagcatagcactgtggaggagtgcgaggagaggcgggactccctgttcagcccg
taccggcggagcagctacacgggctaccaccacggcggcgggaagaggaactccacggtg
gactgcaacggcgtggtgtctctgatcagtccggggaccggcggacgccttctgcctgag
gtgaaaatagataaggcatctgctgacgacagtgatttgttacaggacttgaagcccact
actgaggttgaggtgaagaagaagctgtctggttccctgatggtgtctgtggaccagctc
aatacctccttcggaaggaaagagcgggccaacagtgtcatgagcgtcatcaccaacaca
ctagtggaggagctggaggagtctcagcgtagttgtccaccttgctggtataagttctcc
aacatcttcctcatctgggagtgttgtcccatctggctgaagatcaaggagattgtcaac
ctgatcgtcatggaccctttcgtggacctggccatcaccatctgtatcgtcctcaacacc
ctcttcatggccatggagcactaccccatgaccccgcactttgaggaggtgctgtctgtg
ggaaacctggtgttcacagggatctttgctgtggagatgtttgccaagctggttgccatg
gatccctactactacttccaggaagggtggaactgctttgacggcttcattgtgacccta
tcgttagtggagctggcattggctgacgtggagggtctgtccgtgctcagatcattccga
ttgctaagagtgtttaaactggccaagtcgtggcccacactcaacatgctgatcaagatc
atcggtaactctgttggcgccctgggaaacctgaccctcgtcttagcgctcatcgtcttc
atctttgccgtagtcggcatgcagctgttcggcaagaactacaaggactgtgtgtgtaag
atcgccctggactgtaagctgccccgctggcacatgcacgacttcttccactcgttcctg
atggtgttccgggtgctgtgcggggagtggatcgagaccatgtgggactgtatggaggtg
gccggacagggcatgtgtctcatcgtcttcatgatggtcatggttatcgggaacttggtg
gtgttgaaccttttccttgccttgctgctgtcctcgttcagcgcagacaacttagccgca
acagacgacgacggagagatgaacaaccttcagatctccgtcatccgcatcaagaagggc
gtcgcctggttcaagatcacgctggcagagttggtgctcagcttgaccaagaagccgccg
gtggaggatgaacagaaacctttagacgacatgtacaacaagaagctgaactgtatcgcc
aaccacagtggtgtggatatcaaccgcgacctggactacaccaagaatggtaacggcacc
actagtggtatagggagcagcgtcgggaagtacatgatcgacgaggaccacatgtccttc
atccataatccgaacctgaccgtgtgcgttcccatcgcggtcggagagtccgacttcgag
aacctcaacaccgaggacttcagtagcgagtcggagaacgagaacagcaaagagctggac
gacaccagctcatcggagggcagcaccatagacatcaagcctgatgtggaggtggaggcg
gtggtggtggaggctgtggaagagtacctagacccagaaaactgttggacacctgagtgt
attatcaagtatccatgctgcgacgtgcctatcactcacgggtggggaaaatattggtgg
ttcctgagaaagacatgctatctaattgtggagcataactggttcgaaaccgtcattatc
tttatgatcctactcagtagtggggccctggcttttgaggatgtgtacatccagcagagg
aagaccatcaggaccatcttggaatacgccgacagtgtgttcacatacatctttatccta
gagatgttgctcaagtgggtcgcctacggattccacaagtacttcaccaacgcctggtgc
tggctcgacttctttattgtcgatgtgtctataatcagtctggtagctaatgcactgggc
tactcggatctaggtcctattaaatcactaaggacactaagggccttgagacccctcaga
gccttgtcacgttttgaagggatgagggtggtagtcaacgccctggtgggagccatcccc
tccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagtatcatggga
gtcaacttgttcgcgggcaagtactactactgtttcaaccagacctcagaggataacttt
cttgccaccgaggtcaacaacaagacacagtgcctggcccttatcaatcagaacttcact
gaggtcaggtggaagaatgtcaagatcaactttgacaatgttggcgctggatacctggct
ctgcttcaagtggcgacattcaaaggctggatggacatcatgtacgcagccatagactcc
agaagggtggaggaccagcccatctatgaagacaacctctacatgtacatctacttcgtc
atcttcatcatcttcggatccttcttcaccctcaacctcttcatcggtgtcatcattgac
aacttcaaccaacagaagaaaaagtttggaggtcaggacatcttcatgacagaggaacag
aagaagtactacaacgccatgaagaaactgggttcaaagaagccccagaaacccattccc
agaccacagaactatatccaagggttggtgtttgactttgtgacccagcaagtcttcgac
atctccataatgatgttgatctgcctcaacatggtcaccatgatggtggagacagacgac
cagtcggatgagacggagaacatcctctattgggtcaacttcattttcattgtggctttc
accatcgagttcgtcctgaaactcttcgccctgcgccactactacttcaccaatggctgg
aacgtgttcgacacggtcgtggtcatcctgtccatcgcgggcatgttcctggctgacatc
attgagaagtacttcgtttcgccaacccttttcagggttatccgattggctcgaatcggc
cgcatcctgcgtctgatcaaaggagccaagggcatacggactttactcttcgccttgatg
atgtcacttccagccctgttcaacatcggcctcctgctcttcctggtcatgttcattttc
agcatcttcggaatgtccaacttcggctacgtcaaacacggggccgggatagacgacatg
tataactttgagaccttcgggaacagcatgatctgcttattcatgatcaccacgtctgca
ggctgggatggtctcttgctccccatcctcaactaccctcctgactgtgacccaaccatg
gagaacccaggtgcaccgtctacaggcaactgcggcaacccctcagttggcatatttttc
tttgtcatgtatatcattatttccttccttgtcgtagtcaatatgtacatcgccatcatc
ttagagaatttcagtgtagcgacagaagagagcgccgacccgctcagtgaagacgacttc
gagaccttctatgaaatctgggagaaattcgacccctctgcttcccagttcatcaccttc
caaaaactgggtgactttgccgacaccctggagcaccctttccgcgttcccaaacccaac
accatcgagctgatcgccatggacatgcccatggtcagcggcgaccgcatccactgcctg
gacatcctgtttgccttcaccaagcgtgtgctgggcgacagtggggagctggacatgcta
cgcacgcagatggaggagcgctttgtggcggctaacccctccaaggtctcatacgagccc
atcacttctacactgcgccggcgccaggaggacgtatccgcacggtgcatccagaaagcc
taccgcgctcacttgcttaaacggggcttcatctgcaagcgcaggcccaagaccaagctg
gagaatggtgggaccaacaacgaggagaagaaagagagtacaccctccaccgcctctctt
ccctcctacgacagcgtgaccaaacctgacaaggagaaacaggaggagaacgagggagag
aggaaagagaaggacagaaaccaaaaagatgagcgggaatcgaagtgttag
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integrated database retrieval system
