Salvelinus fontinalis (brook trout): 129860575
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Entry
129860575 CDS
T11136
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129860575
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129860575
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129860575
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129860575
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129860575
NCBI-ProteinID:
XP_055787070
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Position
8:12328186..12402969
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AA seq
518 aa
AA seq
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MATNRERQVGQVGHMTGFPPAVYPFAFNSMRNHSSFDLLSNSSLFGRFSTDLPKEMAALS
VETQSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNM
VYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEGERPVRNDRNKKKKDVKEELVPPE
SYELSGELEELVNKVSKAHKDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCI
IKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQ
MHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLL
EALKIYARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLEN
PEAFEDQTESSGESSPPPAPPAAPPASTKPPTTMKTEAEDEEDSWGTENGSEPSPEEEDE
DDYDDGEEEDRGSDSEGESWALESSSEGDRKSHAGRAQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggagcggcaggtgggtcaggtgggtcacatgacagggttcccacct
gctgtctacccatttgccttcaactccatgcggaaccactcctcctttgacctgctgtcc
aatagcagcctgtttgggagattcagcaccgacctccctaaagagatggctgcactgtcg
gtggagacccagagcaccagctcagaggagatggttcccagctctccctctccacctccc
ccgccacgcatctacaagccctgctttgtgtgccaggacaagtcctccggctatcactac
ggggtcagctcctgtgagggctgcaagggtttcttccgacgcagtatccagaagaacatg
gtgtacacctgtcaccgagacaagaactgccagatcaacaaggtcaccaggaaccgctgc
cagtactgccgactgcagaagtgcttcgaggtcggcatgtccaaggaaggtgagagacca
gtgcgtaacgacaggaacaagaagaagaaggacgtgaaggaggagttggtgccgccggag
agttatgagctgagtggcgagctggaggagctggtcaacaaagtcagcaaggcccacaaa
gacaccttcccctcactgctgcagctgggcaaataccacaccaactccagtgcagagcag
cgcgtgcagctggacctggggctgtgggataagttcagtgagctctccaccaagtgcatc
atcaagatcgtggagtttgccaagcgcctccccggcttcaccaccctcaccattgctgac
cagatcaccctcctcaagtcagcctgcctggacatcctgatgttgaggatctgcacgcgc
tacaccccagagcaggacaccatgactttctccgacgggctgaccctgaaccggacccag
atgcacaacgcaggctttggcccgctcacagacctggtgtttgccttcgctggccagctg
ctgcctctggagatggacgacacagagacgggcctcctcagcgccatctccctcatctct
ggagaccgtatggacctggaggagccccagaaggtggacaagctgcaggagcccctgctg
gaggccctgaagatctacgctcgtcgcagacgccccaacaaaccacacatgttcccccgc
atgctgatgaagatcactgacctcagaggcatcagcaccaagggtgctgagagggccatc
actctgaagatggagatcccaggccccatgcctcctctgatcagagagatgttagagaac
ccagaggccttcgaggaccagacagagagcagtggagagagctccccaccgcctgcccct
cctgccgctccaccagcctccaccaagccccccaccaccatgaagactgaggcagaggac
gaggaggacagctgggggacagagaacggaagtgagccctccccagaggaggaagatgag
gatgattatgatgatggggaggaagaggacaggggctcggacagtgagggggaatcctgg
gctctggagagtagcagcgaaggggataggaagagccatgctgggagggcgcagtga
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