Salvelinus fontinalis (brook trout): 129860739
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Entry
129860739 CDS
T11136
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5
KO
K07374
tubulin alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon04210
Apoptosis
sfon04517
IgSF CAM signaling
sfon04530
Tight junction
sfon04540
Gap junction
sfon04814
Motor proteins
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129860739 (tuba5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129860739 (tuba5)
09143 Cell growth and death
04210 Apoptosis
129860739 (tuba5)
09144 Cellular community - eukaryotes
04530 Tight junction
129860739 (tuba5)
04540 Gap junction
129860739 (tuba5)
09142 Cell motility
04814 Motor proteins
129860739 (tuba5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129860739 (tuba5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129860739 (tuba5)
03036 Chromosome and associated proteins [BR:
sfon03036
]
129860739 (tuba5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129860739 (tuba5)
04147 Exosome [BR:
sfon04147
]
129860739 (tuba5)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129860739 (tuba5)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
129860739 (tuba5)
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
129860739 (tuba5)
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129860739 (tuba5)
Exosomal proteins of other body fluids (saliva and urine)
129860739 (tuba5)
Exosomal proteins of colorectal cancer cells
129860739 (tuba5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
129860739
NCBI-ProteinID:
XP_055787410
LinkDB
All DBs
Position
8:16965846..16977859
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISVHVGQAGVQTGNACWELFCLEHGVGPDGVFNEEDQGPNSRTDPFNTFFNTGSSG
RHVPRAIFVDLEPTVVDEVRTGMYRQLYHPEQLISGKEDAANNYARGHYTVGKEIIDGVL
ERVRKMTDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST
AVVEPYNSILTTHTTLDHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYAPIISAEKAYHEQLTVSEITTACFEPA
NQMVKCDPRHGMYIACCMLYRGDVVPKDVNAAIQNIKTKRSIQFVDWCPTGFKVGINYQP
PTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS
EAREDLACLEKDYEELGRTSTDSDDDEASEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgtatctccgtccacgtgggtcaggcgggagttcagactggcaatgcatgc
tgggaactcttctgcttggaacacggtgtggggcctgacggggtgttcaatgaagaggac
caggggcctaattcacggactgaccccttcaacacctttttcaacacaggaagttctggc
cgccatgttcccagggccatatttgtggacctggagccaacggtggtcgatgaggtcagg
acgggaatgtacaggcagctctaccatcctgagcagctcatctctggaaaggaggatgca
gccaataactacgcccgtggacactacaccgtggggaaggagatcattgacggggttctg
gagcgtgtccgtaaaatgactgaccagtgcacagggctacaaggattcctcatcttccac
agcttcggaggcggcactggctctggtttcacctctctgctgatggagcgcctgtctgtt
gactacggtaagaagtccaagctggagtttgccatctacccagctccccaagtgtccaca
gctgtggtagagccatataattccattctgaccacccacaccaccctggatcactctgac
tgtgccttcatggtggacaatgaggccatctacgacatctgtcgccgcaaccttgatgtt
gagcgtccatcctacaccaacctcaacagattgatcggtcagatcgtttcctccatcact
gcctccctacgctttgatggtgccttgaatgtagacctcacagagttccagaccaattta
gtcccattcccccgcattcatttccccctggtcacctacgcgcccattatctccgctgag
aaggcctaccatgagcagctgaccgtctctgagatcaccactgcctgcttcgagccagcc
aatcagatggtcaagtgtgaccctcgccatggcatgtacatagcctgctgtatgctgtac
cgtggagatgtggtgcccaaagatgtgaatgctgccattcaaaatatcaagaccaaacgt
tccatccaatttgtggattggtgccccaccggtttcaaggttgggatcaactatcagccc
ccgactgccgtacctggaggtgatctagctaaagtccagagggctgtgtgcatgctgagc
aacaccactgccattgctgaagcctgggcccgtttggaccacaagtttgacctcatgtat
gccaaacgtgcctttgtgcactggtatgtaggtgagggcatggaggagggagagttctct
gaggccagagaagacctggcttgtctggagaaggattatgaagagctgggcagaacaagc
acagactctgatgatgatgaagcgagtgaggaatattaa
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