Salvelinus fontinalis (brook trout): 129860820
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Entry
129860820 CDS
T11136
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04517
IgSF CAM signaling
sfon04518
Integrin signaling
sfon04519
Cadherin signaling
sfon04520
Adherens junction
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
sfon05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129860820
04518 Integrin signaling
129860820
04519 Cadherin signaling
129860820
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129860820
04520 Adherens junction
129860820
09142 Cell motility
04820 Cytoskeleton in muscle cells
129860820
04810 Regulation of actin cytoskeleton
129860820
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129860820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129860820
04147 Exosome [BR:
sfon04147
]
129860820
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129860820
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129860820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
NEMO
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
129860820
NCBI-ProteinID:
XP_055787594
LinkDB
All DBs
Position
1:complement(69256334..69317535)
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AA seq
1165 aa
AA seq
DB search
MPVFHTKTIEGILEPVAQQISHLVIMHEDGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENACSKLVQAAQMLKADPYSVPARDFLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLFNSLNTVKQLLPVLISAIKIFVATKSTHSAGVDEAERNRCFTFEKMSAE
ISEIIRVLQLTTWDEDTWANKDMECMKRSLAVIEAKMALAKAWLKDSHGQPGEPGDVAVR
VILDEAGKVGELCAGKERRDALGTAKTLGQMTDQVTELRVRGHGPSPPCVQRAGQCSQGL
DLLLGKVDSATRRLEALTKAKLAFARRLDASQAWLADPNGGPEGAENIRALLANAQKIAD
LCEDLFERDDIQRSINEIAGLTARLVELRKRGKGDSPEARALCKLIGAALLTLQAKTNRA
VANMRPAKPAITLQGKMEQALRWVNNPGQDDRGVVCERPQHNSGQAAIRGLVSEGRRLAG
GLGGPYRQDMIVRCDRNEALMTSLADIAGRGEAEAPQAKATASQLQESLKDLKGRMQEVM
TQEVSDVFSDTTTPIKLLAVSATAPPEAPHREEVFDERAGNFEAHAGRLGATAEKAAAVG
SANKNTVEGIQATVKHTRELTPQVTSAARILLKNPGNQAAYEHFDTMKNQWIDNVEKLTG
LVDEAIDTKSLLDASEEAIKKDIDKCRVAIANVQPQMLVAGATSIARRANRVLLVAKREV
ENSEDPWFREAVKRASDILSHTISPMVIDAKAVAGNIQYPGTYTHAHIYALLLPPEFDCN
SCPYLSHSALQKAFLDSCLRILAAVGKVREAFSLPEPDFPPPPPDLDKLHVSDQEQPPPK
PPLPEGEVPPPRPPPPEEKERDKDEDFPEQKAGELLSEPMMVAARQLHDEARKWSSKPEE
EEGVEVDDEDEFTDGEDDYEPELLMMPSNGNAVNQPILAAAQSLHQEARKWSSKGNDIIA
AAKRMALLMAEMSRLVRGGSGNKRAMIQCAKDIAKASDEVTRLAKEVAKQCTDRRIRTNL
LQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREA
EAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacacgaagaccatcgagggcatccttgagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggacggggaggtggacgggaaggccatcccggatctg
accgttccggtggccgcggtacaggcagcggtcagtaaccttgtcagggtgggaaaggag
actgttcagaccacagaggaccaggtgatgaagagagacatgcctcccgccttcataaag
gtggagaatgcgtgttctaagctcgtgcaggctgctcagatgttgaaggcggatccctac
tcggttcctgccagagacttcctcattgacggttctagaggaatcctgtctggaacctca
gacctgctgctcactttcgacgaagctgaggtgcgtaagatcattcgtgtgtgtaagggg
atcctggagtatttgactgtagctgaggtggtggagaccatggaggacctgatcacctac
accaagaacctaggaccaggtatgactaagatgtctaagatgattgaggagcgacagcag
gagttgacccatcaggaacacagacagatgctattcaactccctgaacactgtcaaacaa
ctactgcctgtactcatatcagccataaagatctttgtagcgactaagagcacacatagt
gctggggtggatgaggcagagagaaacagatgctttacgtttgagaagatgagtgctgag
attagtgagatcatcagagtcctacagcttaccacctgggatgaagacacatgggccaac
aaggacatggagtgtatgaaacgttctctggctgtgatagaggctaagatggccctggcg
aaagcctggctcaaagactcccatggacaaccaggcgagcccggggatgtagcggtgcgt
gtgatattggatgaggcagggaaggtaggagaactgtgtgctggaaaggaacgcagagac
gcactgggaacagcaaagactctgggacagatgaccgaccaggtcacagagctacgtgtc
agaggacatggtccgtctccaccatgtgttcagcgggccggtcagtgttctcagggtctg
gacctgctacttgggaaagtggacagcgccacccgcaggctcgaggctttaactaaagct
aaactggcattcgctaggagactggatgcttcccaggcatggctggcagatcctaatggg
ggtccagagggtgcagaaaacatcagagccttgctggccaatgcccaaaaaattgctgac
ctgtgcgaagacctcttcgagagagacgacatccagagatccatcaatgagattgcgggg
ctcaccgcacgactagtggagctacgcaagcggggtaaaggggacagtccagaggcgcgt
gcgctatgtaaactcattggagcagctctcctgaccctgcaggctaagaccaacagagcg
gtggccaacatgagacctgccaaaccagccatcactctgcaaggcaagatggagcaggcc
ctacgctgggtcaacaaccctggacaggatgacaggggtgtggtgtgtgagcggccacag
cacaactcaggtcaggcagcaatccggggcttggtatcggagggccgccggttggctgga
gggctgggggggccgtaccggcaggacatgattgtccgctgcgatcgcaatgaggcgctg
atgacatcactggcagacatagcggggaggggagaggccgaagccccgcaggctaaagct
actgcttcacaactacaggaaagtctgaaggacttgaagggtcgtatgcaggaagtcatg
acccaggaagtatccgatgtgttcagtgacaccaccacccccattaaactactggccgtg
tctgcgactgcccccccagaggccccacacagagaggaggtgtttgatgagcgtgctggt
aactttgaggcccatgcgggtcgcctgggcgcaacagcggagaaggcggcggccgtggga
tcagccaataagaacacagttgagggaatacaggctaccgttaaacacaccagagaactc
actccacaggtgacctccgcagctcgtatcctgttgaagaatccaggtaaccaggcggcc
tacgaacactttgacaccatgaagaaccagtggatcgacaatgtagagaaactcactggt
ctggtggatgaagccatagacaccaagtctctgctggatgcgtctgaggaggcgataaag
aaggacatcgataagtgtcgtgtcgccatagcaaatgtacagccgcagatgctagttgcc
ggggcgaccagcatagctcggcgagcaaatcgcgtactactggtagcgaagagagaggtg
gagaactcagaggacccatggttcagagaagcagtgaaacgtgcatcagatatactcagc
cacactatatcacctatggttatagacgctaaggctgtggccggaaatatacagtaccca
ggtacttacacgcacgcacacatatatgccttgcttctgccaccagaatttgactgtaat
tcatgcccatacctctcccactcagcccttcagaaggcatttttagattcttgcctcaga
attctggctgctgttgggaaggtcagagaagccttcagcctcccggaaccagacttcccc
cctccacccccagacctagacaagctacacgtgagtgatcaggagcagcccccccctaag
ccccccctaccagagggagaggtgccccctcctcgccccccacctccagaggagaaagag
agagacaaagatgaagactttccagagcagaaggcaggagagctgctcagtgagcccatg
atggtggctgctaggcaactacacgacgaggcacgcaagtggtccagcaagcctgaggaa
gaggagggtgtagaggtagatgatgaagacgagtttactgatggtgaggatgactatgag
ccagagctgttgatgatgccgtctaacggcaatgccgtaaatcaacccatcctagccgcc
gcacaatcgcttcatcaggaggcgcgcaagtggtccagcaagggaaatgacatcattgcg
gcagccaagaggatggcattgctgatggctgagatgtcccggttggtacgcggcggcagc
ggtaataagcgggctatgatccagtgtgctaaagatattgccaaagcctcggatgaggtc
accaggctggccaaagaggtggccaagcagtgtactgaccgacgcatcagaaccaacctg
ctgcaggtgtgtgagcgtatccccaccatcagtactcagctgaagatcctgtcaacagtc
aaagccaccatgctgggacgaaccaacatcagcgaggaggagtctgaacaggctacagag
atgctggtccataatgcccagaacctgatgcagtcagttaaggagaccgtgagagaggcc
gaggctgcttcaatcaagatccgcaccgatgcaggcttcaccctgcgctgggtccgcaag
accccctggtaccagtaa
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