Salvelinus fontinalis (brook trout): 129860860
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Entry
129860860 CDS
T11136
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129860860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129860860
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129860860
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129860860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-UBR
zf-RING_4
zf_RING_Vps8
U-box
Motif
Other DBs
NCBI-GeneID:
129860860
NCBI-ProteinID:
XP_055787693
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All DBs
Position
8:21346820..21349344
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AA seq
541 aa
AA seq
DB search
MPLSKPKELLEHELSCPICLQLYTNPVYLPCGHNYCLACIQKATDVNGGEKSLPQCPECR
EEYGGTETLQRNFKLCGIIESYRAVAPADHLKREPLKVRCDHCLDIETLAIKTCLKCEVS
LCARHLQHHTERESFRTHDLVEPQTELGQRGCAIHGRLLEYFCASDMTSLCANCFIEGTH
QNHDVLAFEAAEEEMRRALEIQSKAVANRLQLTETLLQRAAEDQGTSEAVGDKLLSKSVA
LMDSIAGLVSRYKDRMSLLLEKERGHRRESWQSGLGLLEEQQQQLMEAQQRTTEVLTETE
KCLFINRFLLIEPQLREVMTGTVARVPNKVPLNPKRLQASLRMEDFRAEMARLLQSLHVL
LNPLELTFNLSTAHTSLLLSNDLRTVKYSGTKQAYADNQERFSTAPQVLCSQGFTSGEHI
WVVEVGDQSMWSVGLCYKSMPRRGDHSRLGHNTASWRLQWKNKKLTACHASSNVALAEMA
NQPLRVEMALDYEGGTLICHSTKDRREHLHTFRAVFREPVYPAFSILSTKEQSWITLQSG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtctaaaccaaaggagctgttagaacatgagctcagctgccccatctgcctg
cagctctacacgaatcccgtgtatctgccctgtggccataactactgcctggcctgcatt
cagaaggctacagatgtcaacggtggagagaagagccttcctcaatgccctgagtgcaga
gaagagtacggcggtacagagacactgcaaaggaacttcaagctctgcggcatcatagaa
agctacagggccgttgcgccagccgaccacctgaagagagagccgctgaaggtgcgctgt
gaccactgcctggacatagagacactggccatcaagacctgcctaaagtgtgaggtgtcc
ctgtgtgccaggcacctgcagcaccacactgagagggagtccttcaggacccatgacttg
gtggagccccagactgagctgggccagagaggttgtgccatccacggacgcctgctggag
tacttctgcgccagcgacatgacctctctctgtgccaactgcttcattgagggcacccac
cagaatcatgatgtcctggcatttgaggcagccgaggaggaaatgaggcgggccctggag
attcagagcaaggcggtggccaacaggctgcagctgaccgagaccctgctacagagggct
gctgaggaccagggcacctctgaggctgtgggagacaagctgctgtccaagtctgtggct
ttgatggacagcattgccggcctggtgagcaggtacaaggacaggatgagcctgctgctg
gaaaaagagagaggccatcggagggagagctggcagagtggcctggggcttctagaagaa
cagcagcagcagctgatggaggcccagcagcgcaccactgaggtcctcacagagacagag
aagtgtctgttcatcaacaggttcctgctaattgagccccagctcagggaggtcatgacg
ggcaccgtggccagagtgcccaacaaggtccctctgaaccccaagcggctccaggccagc
ctgaggatggaggacttcagggcagagatggctcggctcctccagtctctccacgtcctg
ctaaaccctctggagctgacctttaacctcagcacggcccacaccagcctgctgctttcc
aacgacctgcggacagtcaagtacagcggtaccaagcaggcctacgctgataaccaagag
aggttcagtaccgctccccaggtcctgtgctcccagggcttcaccagtggggagcacatc
tgggtggtggaggtgggcgaccagagcatgtggtcagtgggcttgtgctacaagagcatg
cccaggaggggtgaccacagccggctggggcataacacggcctcctggcgtttgcagtgg
aagaacaagaagctgactgcgtgccatgcctcctcaaacgtggcgctggcggagatggcc
aatcagccgctgagggtggagatggctctggactatgaggggggaacactaatctgccac
agcaccaaggaccgtcgggaacatctgcacacgttcagggctgtgttcagagagcctgtg
taccctgcgttcagcatcctctccaccaaagaacagtcctggatcacgctacagagtgga
gtgtaa
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