Salvelinus fontinalis (brook trout): 129860966
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Entry
129860966 CDS
T11136
Name
(RefSeq) protein SOGA1-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129860966
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129860966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129860966
NCBI-ProteinID:
XP_055787914
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Position
8:complement(25772832..25855665)
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AA seq
1830 aa
AA seq
DB search
MTKTKADVNSPTHFVSPKERRHRHKMESGTESANNGQAKPQQQHQFEQQPVVQPIQVNAK
KKNNRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGSIHLGSRVSRRSPVSGKETKSEK
GKLTGKSTLSVGSAQKSSSKSMKGGRRKVSDASNASDDQSKDSGCAAGKRSSTDSSSELS
DCASEENKLSTDALSSDTESNSRGGGLDGDQPSSDCGHGPPDRGSPGDHHAKTPVDKNRI
SLGVETVGGSISPGDERSLTSFDSRVPASTSLAFSDLTEEFMDGMHEEFVREIEELRSEN
DYLKDEMEELRSEMLEMRDMYMEEDVYQLQELRQQFEQANKTCRILQYRLRKAERRSLRV
AQTGQVDGELIRTLEQDVKVAKDVSIRLHNELDSVEKKRGRLEQENEELRVRLQDLEVAK
QVLQAEMEKQRENSLKKRGARPNNKPEKKPSVQQEDNSDLKCQLHFAKEESVLMCKKLTK
MAKDSEAMREELAKYRSVYGDVDASLTVDEVNDSPHTREAEVRVHLKLVEEEANLLSRRI
VELEVENRGLRAEMDDMKGQELPPGLGVGGMGGPGGGSLDNVMELQRHLQFVEEEAELLR
RSLLEMEEQNKLLMNEINRYKSELPLTLDPNQDDSSSISLLEDGHVGGALISTEAPHEEL
LQAARLQIGELSGKVKKLQYENRVLLSNLQRCDLASYHSSSRPALETDAEAGDSAECLPS
QACREGPIGGENKPLEEKEKKTSPGVPIHLHGNVPLGLKDHEALLAMRDQARLISTAIQL
LTASDSNCPSLSLYRKISSNSSGETAEPCVPEKSQQSQPSELQDLPLVEALTGRLRALHT
QLQAFVKRVESLGSAPPGKEQVEGASPLPLLSEAGDSVVDTPSASHPCPPDDQAGEITAG
QKQSNFRDQSEREVKGQEEEEGDSHIDSNKNQVKQETDTALQISELQALLLEARENACRT
QEELTVERQDHRDHTHSSSQTFTQLQEEHQKALTRRDFQLQSLSLQTRLQQKFWSQERNL
MLQESQQLKQTLLLLSLKLRCFLKQWRLGRKLDTEAKDVLEVNSLKDLYLLLEEESLAAH
PQQGDNKMTSAEEQHLCPTISKELCVLEKSYTQTSGVSSTLADLKGVLQDLSGELREERQ
GSQELTQQFARAKASWEVERTELKSLITQLESKVGMAALSRGEKDLQGPPDLKVALKRER
EEHQHLLADSYAAVMDLTKQLQMGERNWNREKLELLEHFSQERGQWEQRLQCKMSLHYKT
TPETKTALDVVTNGTNLSSTKSIPSMLEGLLEACPFLPGQEVNGTDNEEGEKDQPSTQAH
SLLTHTDPGDLTRKNWKYLTNEMALMEQGDAPFKTWDCPSSPSSFLDLESIQRSYTAPDK
TGIRIYYSPPTMRRMESRLAKEKQDKPQAQQGHLSRASTPSDAVALGGQRPSSSSASSSS
SYDQWLSSLSKQHRDLLENSSGGAGVTPFHGLEISANLSDDMKEMTNCVRQAIRSSSLER
KCSKDVSSQTVGVSSRSTQTVQFVSVGLQTDGLGSRGVGGFHTKSSWSLRPSSSLASARS
RHISSSLDKVHSRIDRPCCSPKFGSPKLQRRISASSSKLDGGGLSSASSRDRSLWNLHQR
SSTSSGSAWARSTTTRDSPVLSGLNDGLSSLFSVVEHSGSVESLWKSEPGASPARQAAGK
PSGPGPDTGAQKYGPFQEFFRNVCGRTGTTMPGGGERGQREVGAMDEPKPECLSGVSLVG
NDSVTKIVNKRFMRQMPREELGATANDLTARDLTLSSSMEDAACDCNSQSLTSCFARPSR
SATRHSLAHCMHRSQEPPTATEERVDAGNE
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaaaggctgatgttaattcgccaactcactttgtctcgccgaaggaaagg
agacacaggcacaaaatggaaagcgggacggagagcgccaacaacgggcaggcgaagcct
caacagcagcaccagttcgagcaacagcccgtagtgcagcccattcaagtcaacgcgaag
aaaaaaaataatcgggctccatcacccgccagacccaaggatgtgcctggatggtccctc
acgaagatccgtggaggaatcggtacaccaacactgagcgttaaaccaggatccatacat
ttaggcagccgggtgtccaggcgtagtccggttagcgggaaagagacgaaatctgagaaa
ggaaaactgacgggaaaatccacgttatcggtaggcagtgcccagaagagcagcagtaaa
tcgatgaaaggtggtcggaggaaggtgtccgatgcgagcaacgcctccgacgaccagagc
aaagactcaggttgcgctgcgggaaaacggtcgtcaacggatagcagttccgagctctcc
gattgtgcatcggaggagaataaactatccaccgacgctctgagtagtgacaccgaatcc
aacagccgaggcgggggtcttgatggcgatcaaccaagcagtgactgcggacatggacca
ccggataggggtagtcctggtgaccatcacgccaagaccccagttgataagaaccgaatc
tccctgggagtggagaccgtaggggggagcatttctcccggggatgaacggtctcttacc
tcgttcgacagccgggtgcctgccagcacatccctagctttctccgacctgacggaagag
ttcatggatggcatgcatgaagaatttgtcagagaaatcgaggaactgagatcagaaaac
gattacctaaaagatgagatggaggagctgcgctctgagatgttggagatgagggacatg
tacatggaggaggatgtgtaccagctgcaggagctgaggcaacagtttgagcaggccaac
aagacctgccgcatcctgcagtaccgcctccgcaaggctgagagacgcagcctccgcgtg
gcccagacgggacaggtagacggggagctcatccgaactctggagcaggacgtcaaggtg
gctaaagacgtgtccatccggctgcacaacgagttggactctgtggagaagaagaggggt
cgtctggagcaggagaatgaggagctgagggtcaggctccaggacctagaggtggccaag
caggtcctgcaggctgagatggagaagcaacgagagaactctctgaagaagagaggcgct
cggccaaacaacaagccagagaagaagccatctgtccagcaggaggacaactctgacctc
aagtgccagctccattttgccaaggaggagtccgtgctcatgtgcaagaagctgaccaag
atggccaaggacagcgaggccatgcgggaggagctggccaagtaccgctcggtctacggc
gatgtggacgcctcactcaccgtggacgaggtcaacgactcaccccacacccgcgaggcc
gaggttagagttcacctgaagctggtggaggaggaagccaacctgctgagccggcgcatt
gtggaactggaggtggagaaccgtggcctacgggccgagatggacgacatgaagggccag
gagctgcctccagggctgggggtgggaggcatgggaggccctggaggaggaagtctggat
aacgtgatggagctccagaggcacctgcagtttgtggaggaggaagcggagctgctacgg
cgctcgctgctggagatggaggagcagaacaagctgctgatgaatgagatcaatcgctac
aagtcggagctgccgctgacgttggacccaaaccaggatgactcctcgtccatctctctc
ctggaggacggtcatgttgggggagctctcatcagcaccgaggccccccatgaggagctg
ctgcaggccgccaggctccagatcggggagctgagcggtaaagtgaagaagctccagtac
gagaaccgtgtgttgctgtccaacctgcaacgctgcgacctggcctcctaccacagctct
tctaggcccgccctagagaccgacgctgaggcaggggactcggccgagtgcctccccagc
caagcgtgccgggaaggccccattggaggggagaacaagcccctggaggagaaggagaag
aagacgtccccgggggttcccattcacctgcacggtaacgttcccctggggctgaaggac
catgaggccctgctggccatgagggaccaggcccgcctcatctctacagccatccagctg
ctgaccgcttccgattccaactgcccctccctctccctctaccgcaagatctcctccaac
tcctccggggagactgcagagccctgtgtcccagagaagagccagcagtcccaaccctcg
gagctccaggacctgcccctggtggaggctctgacgggcaggctgcgagcgctgcacacc
cagctccaggccttcgtgaagcgagtggagagccttggcagcgcccctcctgggaaggag
caggtggagggggcatcccccctgcctctactgtccgaagctggagactccgtggtggat
acgccctctgcatcacacccatgccctccagacgaccaggcgggtgagatcactgcaggg
cagaagcagtccaactttagggaccaatcagagcgcgaagtgaaaggtcaggaggaggag
gagggtgacagccacattgacagcaacaagaaccaggttaaacaggagacggacacagcc
ctgcagatcagtgagctgcaggcccttctgttggaggcgagggagaatgcttgcaggacg
caggaggaactgactgtggagagacaggatcacagagaccacacccacagcagctcacag
acattcacacagctgcaggaggagcaccagaaggccctgacgagaagggacttccagcta
cagagtctgagtctgcagacgcggctgcagcagaagttctggagccaagagaggaacctg
atgttgcaggagtcccagcagctcaagcagaccctgctgctgctgagcctcaagctgcgc
tgcttcctcaaacagtggcggctgggacgcaagctggacacggaggccaaggatgtcttg
gaggtgaacagcctgaaggacctgtacctgctgctggaggaggagagtctggccgcccac
ccccaacagggagacaacaagatgacctccgcagaggagcagcacctctgccccaccatc
tccaaagagctctgtgtgctggagaagagttacacacagacgagtggcgtgagcagcaca
ctggcagacctgaagggagtgctccaggatctgagcggggagctgcgagaggagcgccag
ggctctcaggaactgacccagcagtttgcccgcgctaaggcctcctgggaggtggagagg
accgagctcaagagcctcattacccagctggagagcaaggtgggcatggctgccctgtcc
aggggggagaaggacctccaaggacctcccgacctgaaggtggcactgaagagggagcgt
gaggagcaccagcacctcctggccgactcatatgcagccgtcatggacctgaccaagcag
ctgcagatgggcgagaggaactggaaccgcgagaagctggagctcctagagcatttcagt
caggagaggggccagtgggagcagaggctacagtgcaagatgtctctgcactacaaaacc
acccctgaaacaaaaactgcactggacgttgttacaaatggaaccaatttatcaagtacc
aagtccatcccgtccatgttggagggtctgctggaggcctgtcctttccttccgggtcag
gaggtcaacggtacagacaatgaggagggagagaaggaccagccgagcacccaggcccat
tcccttctaacccacacagacccgggtgacctcaccaggaagaactggaagtacctgacc
aatgagatggctctgatggagcagggtgatgcccccttcaagacgtgggactgccccagc
tcccccagcagtttcctggacctggagagcatccagaggagctacacggcccccgacaag
accggcatccgcatctactacagcccccctaccatgcgacgtatggagagccggctggcc
aaggagaagcaggacaaacctcaagcccagcaaggccacctgtctcgggcttcaactccc
tcagatgctgtggccctggggggccaacgtccctcctcctcctctgcctcctcctcttcg
tcctatgaccagtggttgagctctctgtccaagcagcacagggaccttctggagaacagc
agcggtggcgcgggggtgacgcccttccacggcctggagatctctgccaacctctcggat
gacatgaaggagatgaccaactgcgtgcgccaggccatccgctccagctctctggagagg
aagtgcagcaaggatgtgagcagccagacggtgggggtgtctagccgctccacccagacg
gtccagtttgtgagcgtggggctgcagacggatgggctcgggtctcggggggtggggggc
ttccacaccaaatcctcctggtccctccggccctcgtcgtcgctggcctcggcccgctcg
cgccacatctcctcatcactggataaggtgcacagccgcatcgacaggccttgctgctca
cccaagttcggctcccccaagctacagcgacgcatttccgcctcctcctccaagctggac
ggaggaggattgtcctcggcttcttccagagaccgcagcctgtggaacctccaccagcgg
tcctcgacctccagcggctcggcctgggcccgttccaccaccaccagggacagccccgtg
ctcagcggcctcaacgatggcctgtccagcctgttcagcgtggtggaacactccggcagc
gtagagtccctgtggaagagtgagccaggggccagcccagcccgccaggcagcagggaag
ccctctggccctggaccagacaccggagcccagaaatacggccccttccaggagtttttc
aggaacgtgtgcggccggaccggaacgaccatgcccgggggaggggagagggggcagagg
gaggtgggggccatggatgagcccaagcctgagtgcctttccggggtttcgctagtgggg
aacgacagcgtcaccaagatcgtcaacaagagattcatgagacagatgcccagggaggag
ttgggggccactgctaacgatctcactgccagggacctgaccttgagctccagcatggag
gatgcagcgtgtgattgcaactcccagtctcttacatcctgcttcgcccggccctctcgc
tcggccacacgccattcactggcccactgcatgcaccgctctcaggagcctcccacggca
acggaggagagagtggatgcaggcaatgagtga
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