Salvelinus fontinalis (brook trout): 129861065
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Entry
129861065 CDS
T11136
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129861065
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
General mRNP proteins
129861065
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
129861065
NCBI-ProteinID:
XP_055788113
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All DBs
Position
8:29821038..29833867
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AA seq
535 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKASSANGHEERSSKKKKRSHSRSSRSPSSDKRRSKSKDRK
KSRDRKRSKSREKKRSRSKERRRSGSHSRERAGRYRGRRSPFLGPKFNGGPGGKIGPPHA
NKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
MANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTAVANPALNLGPSMNQAMN
LPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIYVDKNSPQGNVY
VKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMPSRR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattttgacattgaggccatgctagaggctccatacagaaaggatgagatc
aaggcctctagcgctaatggacatgaggagcgcagtagtaagaagaaaaagaggagccac
agtaggagtagtcggagcccgagctctgacaagcgcagaagcaagagcaaagacaggaag
aagagccgggaccggaaaaggagcaagagtcgggagaagaaacgcagccgcagtaaggag
cgccgccgcagtggctcccatagcagggagcgtgccgggcgctacagaggacgccgcagc
ccctttttggggccgaaatttaacggtggtccaggagggaagattggcccaccacatgcc
aacaaactaagtcgtaggcgctcaagaagtcgtagtcccttcaagaaagacaagagtcca
gtaaggcaaccaattgacaacctgaccccagaggagagggatgcccgtactgtgttctgt
atgcagctggcagcaagaatccgaccacgagatctagaggacttcttctctgctgtgggg
aaagtgagagacgtgaggatgatctccgatagaaactccaggaggtcaaagggcatcgcc
tacattgagtttctggaggcaaattcagtcccgctggccattggcttgactggacagaga
cttcttggagtgccgatcattgtccaggcctctcaggctgagaagaacagagcagcagca
atggccaacaaccttcagaagggtaatgctggccccatgcgcctgtacgtgggctctctg
cacttcaacatcacagaggacatgctgcgaggcatcttcgagcctttcggaaggattgag
agcatacagctgatgatggacagtgaaactgcacgatccaaaggatatggtttcatctca
tttgcagatgcagagtgcgctaagaaagcactggagcagctgaatggctttgagctggcc
ggacggcccatgaaggttggtaacgtgacagaacgcaccgactcctccactgccagctcc
ttcctggacaacgacgagctggagaggacgggcatcgacctgggcaccaccgggcgcctg
cagctcatggcccggttggcagagggtactggtcttcagatccctccagctgcacagcag
gctctacagatgagtggttccatgcactcctcttcaatccacttcggcaacatggcagct
ggtacagctgttgccaaccctgccctgaacctgggtccaagcatgaaccaggccatgaac
ctcccaactcaaccactggctacacactgcctacagctgtccaacatgttcagcccacag
tcggaaaatgagcctggttgggacattgagatccaagacgacgtcatggaggagtgcaac
aaacatgggggaattgtccatatatacgtcgacaagaactcccctcagggcaacgtgtac
gtaaaatgccccactatcccaacagcaatggctgcagtgaatgccctacatggacggtgg
tttgcaggtaaaatgatcactgcagcgtacgtacccctcccaacctaccataaccttttc
cctgattcagtaacggccacccagctactgatgccttcgcggcgataa
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