Salvelinus fontinalis (brook trout): 129861086
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Entry
129861086 CDS
T11136
Name
(RefSeq) poly(rC)-binding protein 4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129861086
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
129861086
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
129861086
NCBI-ProteinID:
XP_055788167
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All DBs
Position
8:complement(30393645..30454439)
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AA seq
478 aa
AA seq
DB search
MRLPVCNSHITMNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESNARV
NISEGSCPERIITITGSTDCVFRAFTMITYKLEEDLTTLVANGTISSKPPVTLRLVIPAS
QCGSLIGKGGAKIREIRESTGAQIQVAGDLLPNSTERGVTISGSQDSVIQCVKLICTVIL
ESPPKGATIPYRPSLSPGALLISGNQVFEASDFTPHPLYSVSQGGLDLQQSDLFQAYTVQ
NQYGIPHTELAKLHQLSMQQNMQQNMQQNMQQNMQQSTMCQQATTILPGMDSNSSQELLI
PNDLIGSIIGRQGAKINEIRQMSGAQIKIGSQLEGTSDRHVTITGTPISINLAQYLITSC
LETAKSTAQAAPMASPNMADLNMAFTQPVSQATSPHSASTLAAMSALSPTPVMGHPYGVL
PFSSLLGVKSVPFLTLSSPTPQVAVTAAPSHTTLAAYTTKISSANCIKKPDRQKFAPY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgtgtgcaactcccacatcactatgaactgtgagcaggacttcggagac
gggggcctgggtgtgacccttacactccgactgctcatgcacggcaaggaggttggcagc
atcataggcaagaaaggagagacggtgaaaagaatacgagaagagagcaatgcacgggtg
aacatctcagagggctcctgtccagagaggatcatcaccatcactggttctacagactgt
gtcttcagagccttcaccatgatcacatacaaactagaagaggacctcactacactggtg
gccaacggcaccatcagcagcaaacccccagtgaccctacgactagtcatcccagccagc
cagtgtggctccctcatcggcaagggaggggccaagatcagggagatcagagagagtacc
ggagcacagatacaggtggcaggggatttgctgccaaactctactgagcgaggggtgacg
atatcggggagtcaggactctgtaatccagtgtgtcaagctcatctgcactgtaatcctg
gagtctcctccgaaaggtgctactattccttaccggcccagcctctccccaggagcactt
ctcatctctggcaaccaggtgtttgaggcatcagactttaccccccaccctctgtactca
gtctcccagggggggcttgacctgcagcagagtgatctcttccaggcctacactgtacaa
aaccaatatggcattcctcatacagagttggccaagctacatcagctatccatgcagcag
aacatgcagcagaacatgcagcagaacatgcagcagaacatgcagcagagtaccatgtgc
cagcaggctacaactattctacccggaatggactcaaactcatcgcaggagctccttatt
ccaaatgatctgataggctcgatcatcggccggcagggcgctaagatcaatgagatcagg
cagatgtcgggggctcagatcaagattggcagccagctagaagggaccagtgaccgtcac
gtcaccattacaggcacaccaatcagcatcaacctggcccagtacctcatcacctcctgt
ttagagacagctaaatccacggcccaagcagcgcccatggcctcccccaacatggctgac
ctcaacatggccttcacccagcccgtctcccaggccacctccccccactccgcctccacc
ctggcagccatgagtgccctctccccaacccccgtcatgggccacccctacggcgttctg
cccttttctagcctgctaggggtcaagtctgtccccttcctgactctctctagccccacg
ccccaggtcgctgtcaccgcagccccctcccacaccaccctggcagcctacactaccaaa
atctcctcagccaactgcatcaagaaacccgacagacagaagttcgcaccctactga
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