Salvelinus fontinalis (brook trout): 129861137
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Entry
129861137 CDS
T11136
Name
(RefSeq) pre-mRNA splicing regulator USH1G-like
KO
K21878
Usher syndrome type-1G protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129861137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129861137
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129861137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
Attacin_C
DUF4692
LTI65_LTI78_N
Motif
Other DBs
NCBI-GeneID:
129861137
NCBI-ProteinID:
XP_055788276
LinkDB
All DBs
Position
1:complement(71963950..71999387)
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AA seq
501 aa
AA seq
DB search
MNDKYHRAARDGYLDLLREATRKELNAPDEDGMTPTLWAVYHGNLDALRLIVGRGGDQDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANVWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVSKLKDRAFRMAERRIKDCVKMQQKHHQRMERKFLKESVASDNSDAMSF
TSYNSSSTLNRKLPQFNTLTSNMPYSQATFHSTAKGRTKIQKKLEKKKQVDGTFKIYEDG
RKSVRSLSGLQLGQDVMFLKQGTYANSKDRSRLNIRDMFPHHGNNHDHHDDDHDDYDDDH
ADTISHISRAISDPGLHEAAYSEISADSGRDSLFTRPGLGTMVFRRNYVSGGLFGIGAPD
KGSVAGSEPVGRAPNVRLRGHLPRRQPSLDDAIEIDSIGSALSLQERHLQELPWEEADVG
LDEELEPENGPLETFLASQSLGEFMPIFRKEKIDLEALLLCSDQDLTSIHIPLGPRKKLL
EACKRRLDTLEEPEGIKDTDL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagtaccaccgggcggcccgggatggctacctggacctactcagagaggcc
actcggaaggagctgaatgcgcctgatgaagatggaatgacaccgactttatgggctgtg
taccacggcaaccttgacgcgctcaggcttattgtgggaagaggaggtgaccaggacaag
tgtgatatctgggggaacactccgctccacctggccgccgccaacggccaccacaactgc
ctatccttcctggtgtcgtttggagccaacgtgtggtgcctggacaatgactaccacaca
cccctcgacatggccgccaccaagagccacatggactgtgtccggtacctggactccatc
gccgccaagcagtcggccctcaaccccaagctggtgagcaagctgaaagacagagcattc
cgcatggcggagaggaggataaaggactgtgtgaagatgcagcagaaacaccaccagcgg
atggagaggaagttcctgaaggagagtgtagcgtcggataactcagatgccatgagcttc
actagttataacagcagcagcacgctaaaccgcaaacttcctcagttcaacactctcact
tccaatatgccatactcacaggccacttttcactccacagccaagggtaggaccaagatt
cagaagaagctagagaagaagaaacaggtggacggcaccttcaagatctacgaggatggg
aggaagagtgtacgttcactgtctggccttcagcttggccaggacgtcatgttcctcaag
cagggcacctatgccaactctaaggaccgctcgcgtcttaacatccgggacatgttccct
caccacggcaacaaccacgatcaccatgacgatgaccatgatgattatgacgacgaccat
gcggacaccatctcccacatttcccgtgccataagcgacccgggccttcacgaggcagcc
tattctgagatcagtgccgactcaggccgtgactctttgttcacccggccaggtctcgga
accatggtgttccgacggaactacgtatctggcggtctcttcggcattggagccccggac
aagggttctgtggctggcagtgaacctgtaggccgggcccctaacgttcgtctccgtggt
cacctcccacgtcgccagcccagcctggacgatgcaatagagatagacagcatcggcagt
gctctgagcctccaggagaggcacctacaggagctgccctgggaggaggctgatgtgggc
ctggacgaggagctggagcctgaaaacggaccactggagaccttcctggcctcccagagc
ctgggggagttcatgcccatcttcaggaaggagaaaatcgacctggaggccctactgctc
tgctcggaccaggacctgacctccatacacatccccctgggacccaggaagaagctacta
gaggcctgtaagagacggttggacaccctggaggaaccagagggcatcaaggacactgat
ctctga
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