Salvelinus fontinalis (brook trout): 129861152
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Entry
129861152 CDS
T11136
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129861152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129861152
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
129861152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
129861152
NCBI-ProteinID:
XP_055788287
LinkDB
All DBs
Position
8:34639325..34650875
Genome browser
AA seq
1551 aa
AA seq
DB search
MEIWPCGNPNPIKVLQSSFYKMMGGSESGSGDKDGVHTVAIQVPIGWQRRAKDGLVVYVS
PSGAVLSSLEEVKSYLLTDGTCKCGLECPLVIHKVFNFSLGVKIQQHSQPVGKAEQDMTK
LCNHRRKVVAMAALCRSMQASQLPYVAHHTEVTSGIMENRDPKRMRVDREEKERGTYTSK
HHLVQSRPNNNLHPNSCGSPKNSPQLVYSYNGSSPLSHNSTNSYHTPDILRRLPPPLNLP
PNTSPFSSYGAPQRSPRTPTPQNLSQGQRAPQTPEALRSPHMGPLSPPPPSSPGTLGSGG
QSHQHGIIVGSPLSPSCSPSPSVSMNCPSPRQRSRHPSASSAHSEQGVGGVVLGGYPPRR
ISSSHSPIPGGSPILHFSKYKLEDILEQFKNSGNSSTNNHILHSNSLSNQNNPHILSLAL
EKVGRPTKAPASASGVEISACPSGLPLGQFLDHQKQPHPASFPASSLLSAAAKAQLASQM
THNQSSNSRSILNSALSLEVSRESKQLKVTNSTLHNSLPSIARPLPAASPLLSLSQPLAS
SPLHLSRTDRTSHRKRQRRSPTVLSMLKESQMTSPRTPGDVLNLSSHSQPSSTSVSPYPA
MLENHLQALRLSVRHSGTLAGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSVQNAQ
ATGAQPGSGHCTGGMRQSPRQSPSPSHLNIRPFPMQSPTHHSTTQGPLQPLSPSQSKSRR
GNAQSPSRPHTRTSPKQRRSPSMALSNAQSAQYRSSPSPTPHTPNRLWQAQNQPMDATTI
QSPMGQAFPEVSESMEMESMSTLGPGLNSTSTSNHSSSVTSYSSTTSPRPLDLSNHMLAL
LAASSTTPLGEGGLDRTTGNNTTGVQEPQSVDHQGSTVTKPPEGCSPQALGDSTCSLPLA
EAFPFMSQEQLLQLLSATAGLPSLLDPTILGSLPLGLWIGGQQGHLPISNTPQQHHQLPD
QQLLQQSEQQLLLQHEHHQEQQQKQHQTAHLNHNFPFSLFPCLMGGQGELPLNLLGLLNP
LLPPSAAPTPGQECDLGMGEKLGLQALLMASLLLGQQQTAMLPLSGLGQLSLDLPFRQHI
PALLDGLSLDKGSGLLDPSSLPGPGLLEALQGLLPPADGPLQALQSLLLSTPLPPPAFLS
LSPDLLTAALGSTGLPPAPHLPLTQQPQQPPPQVSASGHDGGMETLIPLSVQGKDNPVLH
QLLPTLLNTGVLGDLSALTNLHSLLGLGAGPLFLPPVQASALGMPLLQGPNGAINLLNNI
QLNMAPPSEGEKPISLQETDSSSPQEDIPANRLTPETAPSPCPPLAPVSQRGEGSVVSVL
DPYASFMDTIYTSFLQVSAKEQEAVQSGADAFGALPPSYPGEHRSPSALLPQASAPLSLS
PRQACTLRNPDLSRLNMEAAHSPAQGTPKPSNDGSTTPPQNKLEFPECHTNPPLLPIYLE
EAKTDSYSQAMSDRQGDRPQAGGYQSPRDGSSCPKEETGGLQHTEQGRNQTAQMGGARRG
RKRKQTLQNVLEDYRELDSPALEEPKPRVVLLKPERSVRGRRRRGARSQRQ
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggccgtgtgggaaccccaaccctataaaggtgctgcaaagcagtttttac
aaaatgatgggaggcagtgagagtggcagtggagacaaggatggagttcacactgtggca
atacaagtccccattggctggcagaggagagcgaaggacgggcttgtggtgtatgtcagt
ccaagtggcgcagtcctttcttcactggaagaggttaagtcatatctgttgaccgatggc
acatgcaagtgtggcctggagtgtccgctggtcatccacaaggtgtttaactttagccta
ggggtcaaaattcaacagcacagccagccggtggggaaggcagagcaggacatgacaaag
ctctgtaaccatcggaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggct
tcacaactgccctatgttgcccatcacacagaggtcaccagtggcattatggagaacaga
gatcctaagaggatgagagtggacagggaagaaaaagaacgtggcacttacacctccaaa
caccatctagtccagtccaggcccaacaataacctccaccccaactcttgtggcagtcct
aaaaattctccccaacttgtgtattcttacaatggctcctcacccctctcacacaatagc
actaactcttatcacacgcctgatattttgaggagactgccacctcctctcaatctcccc
cccaacacctctccattctccagctatggggcacctcagaggtccccacgcacaccaacg
cctcagaacctcagtcagggtcagagggcaccacagactccagaagccctcagatctcct
catatggggcccctctctccccctcctccctcctcccctgggacactggggagtggaggg
cagagtcatcaacatggtatcatcgttgggtctcccctgtccccctcatgttccccctct
ccctctgtgagtatgaactgcccctctccccgccagcgctcacgccacccctccgcctct
tccgctcactctgagcagggggtgggaggggtggtgcttggtggctacccccccagaaga
atatcctcttcacactctcctataccaggggggtcccctatcctccatttctcaaaatac
aagcttgaggacatcttagagcagtttaagaactcaggcaacagtagcactaataatcac
atccttcactcaaactcactgagcaaccaaaacaatcctcatatcctctctctagctctt
gaaaaggttgggaggcccacaaaggcacctgcttctgcctcaggcgtggagatcagtgct
tgtccttctggtttgcctcttggacagttcttggaccaccagaagcaaccccacccagct
tcttttcctgccagtagcctcctctcggcagcagccaaggcccagctggccagccagatg
actcacaaccagagctccaattcacgcagcatcctcaactcagccctctctttggaggtc
tcgagggagtctaagcaattaaaggtaacaaacagcactttacacaacagccttccctca
atcgctaggcccctgcctgcagcctcccccctgctttccctctcccagcccctagcctcc
agtccccttcacctctcccgtacggaccggacatcacacaggaagcggcagcggcgttcg
cccacagtgctcagcatgctgaaggagtcccagatgaccagtcccagaacccccggcgac
gtgctcaacctctcctcacactctcaaccctcctctacctcagtctcgccctaccccgcc
atgttagagaaccacctccaggccctaaggctctcagtccggcactctggcacactcgca
gggccccagaagcagcctgacggcgccctggatttcacaacaatcatggcaggtcaaccg
gatccccccacccagcctctctctgctctgcttcacctgctcagtgtgcagaacgctcaa
gccactggagcccagcccggctctggacactgtacaggaggcatgaggcagagccctagg
cagtctccctcgccctcccatttaaacatcagaccattccccatgcagtcccccactcat
cacagtaccacacaaggcccattacagcccctctctccctctcagtcaaagtccaggcga
ggtaatgcacagtctccgtctcgaccacatacgaggaccagtcccaaacagagacggtct
ccctccatggccttgtccaacgctcagtcagcacaatatcgcagtagcccctcgcccacc
ccacacacccctaataggctgtggcaggcccaaaaccaacctatggatgccaccaccatc
cagtcacccatgggccaggcctttcctgaagtcagtgaatcaatggagatggagagcatg
tcaacactaggccctggtctcaacagcacctccacctccaaccatagcagcagcgtcacc
agctacagcagcaccacctcccccagacccctggatctcagtaaccacatgctggcactg
ctggcagcctcttccaccacacctcttggggaggggggcctggacagaaccaccggcaac
aacactacaggggtgcaagagcctcagagtgttgatcatcagggctccacagtgaccaaa
cccccagaaggctgcagtccccaggctctgggggactccacttgctccttacccctggct
gaagccttccccttcatgagccaggagcagcttctccagcttctgtctgccacggccggc
ctgccctccctcctggaccccaccatcctgggctctctgcccctgggcctgtggattggc
ggtcagcagggtcacctccccatctccaacacacctcagcaacaccatcaactgcccgat
caacaactactacaacaatcagaacaacaactattgttacagcatgaacatcaccaagag
caacagcagaaacaacaccagactgcccatctgaaccacaactttccatttagcttattc
ccctgtctaatgggaggtcagggagagctgcctctgaatctcctgggtctgttgaaccca
ctgctacccccttctgctgcacctaccccaggccaggagtgtgatctggggatgggggag
aaactgggcctccaggctctcctcatggcctccctgctactaggccagcagcagactgcc
atgttgcccctgtctgggcttggccagctgagcctggaccttcccttccggcagcacatc
ccagccctgttggacggtttgtctctggataaagggtctggactcctggacccgtcatcc
ctccccggccctgggctccttgaggccctccagggcctgcttcctccagccgatgggccc
ctccaggccctgcagtcgctcctgctctccacccccctgcctcccccggccttcctctcc
ctcagccctgatctgctaactgctgccctgggctctactggcctcccgcctgctcctcat
ctccccctaacacagcaaccccaacaacccccacctcaggtgtcagcttcaggccatgat
ggggggatggaaaccctaatccccctgtctgtccagggaaaggacaaccctgtcctccac
cagttactgcctactctcctcaacacaggggttctaggagacctgtctgctctgaccaac
ctccacagtcttctggggctaggtgcaggccctctcttcctgccccccgtacaggcctct
gccttgggcatgcctctgctccagggccctaatggggccatcaacctcctcaacaacatc
cagctcaacatggcaccaccctcagagggagaaaagccaatctccttacaggaaacagac
agctcctcccctcaggaggatattccagccaatcggcttaccccagagactgcgcccagc
ccctgtccccccctggcccccgtgtcccagcgtggagagggctccgtggtgagcgtcctg
gacccctacgcttccttcatggacactatctatacctccttcctccaggtcagtgctaaa
gagcaggaagcagttcagtctggggcggatgccttcggtgccttaccgccctcctaccct
ggggagcaccgttccccctccgctctcctccctcaggccagtgcccccctctccctgagc
cctcggcaggcctgcaccctgaggaacccggacctgtcccggctcaatatggaggccgcc
cactccccggctcagggaacccctaaacccagcaacgatggctccaccacgcctccgcag
aacaagttggagttcccagagtgtcacactaaccctcctctgcttcccatctacctggag
gaagccaagacagactcgtacagccaggctatgtcagatcggcagggggacagacctcag
gcaggggggtaccagagtcccagagacgggagcagctgccccaaggaggagactgggggt
ctacagcacacggagcagggcaggaatcaaactgcacaaatggggggagccagaagaggc
aggaaaaggaaacaaacgctacagaatgtgctagaggactacagagaactggattctcca
gccctagaggaacctaaacccagggtggtgctgctgaagcctgagaggtcggtccggggc
aggaggcggcggggagctaggtcccagagacagtga
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integrated database retrieval system
