Salvelinus fontinalis (brook trout): 129861258
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Entry
129861258 CDS
T11136
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129861258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129861258
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
129861258
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
129861258
NCBI-ProteinID:
XP_055788490
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Position
1:complement(72824709..73168206)
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AA seq
1297 aa
AA seq
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MPKGKHSYYPDSPSIRISKMDVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILL
WRTLKYLWTVCCHCNTKKKNAQRVHNPTSHGDGIKHTKETVAALSEVGWMTSVKDWAGVM
ISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYF
GLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFL
NILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVT
MSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKH
IVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGS
VLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYH
NKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTW
QKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDIRESSTLINPG
NHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRSKMSVYKRMMLA
CCFDCGHSECDCSCMSANVHHDSNTKDTLQQRGFPLSPVSLNDCSTTLSASKNNYNGYIK
SIEEEQQTTLSPKKKQRNGNTRNSPNGSPKIMRHDPLLMPGNEQIENMDMNVKKYDSTGM
FHWCQSKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSALVGLRNLVMPLRASNFHYHEL
KPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNID
DASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPLHGGLVRQASI
TTGANIPIITELATLSKTAGKVLPVVSFSQDKSSGINVQIITELVNDSNVQFLDQDDDDD
PDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENA
LRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLR
DAHLNTQSHTSQCTKRYVITNPPYGFELVPSDLIFCLMQFDHNAGQSRASLSHSSHSSHS
SSKKSSSVHSLTATNRTNRAKSRDSRDKQNATRMNKMGQEKTWFTDEPENAAYHRNIHIK
PMSTSHSSHTANHQVNQNPYKSTNNHIPSIREVEDEC
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaggtaaacatagttactacccggactctccctctatccgcatatccaagatg
gatgtgatcatcccgttctccccagatgtgccctgtgatagcaatgggcagcgcatgtgg
tgggctttccttgcctcctccatggtcacgttctttgggggtctcttcatcattctgctc
tggagaactctcaagtacctgtggaccgtctgctgccactgtaacaccaaaaagaagaat
gctcagcgggtccacaaccctacctcccatggggatgggatcaagcacaccaaggagact
gtggctgcactcagcgaggtgggctggatgacctccgtcaaagactgggctggggtcatg
atatcagcccagacactgacgggcagagtcctggtggtgcttgtctttgccctcagcatc
ggagcccttgtaatatacttcatagattcctctgaccccattgagtcctgtcagaacttc
tacaaagacttcacgctacagattgacatggctttcaacgtcttcttcctcttgtacttc
ggtctacggtttattgcagccaatgacaagctgtggttctggctggaggtgaactcagtg
gtggacttcttcactgttcccccggtgttcgtgtccgtttatctcaacaggagctggctt
ggcttgaggtttttaagggcgttaaggttgatacagttctcagaaatcttacagtttttg
aacatattaaaaacaagcaattccataaaactggtgaacttatgttcaatcttcataagt
acatggctaacagcggcaggcttcatacatctggtggaaaactcaggggatccttgggaa
aacttccaaaattcccaagcactttcctactgggaatgtgtctacttactcatggttact
atgtccactgtgggctatggagacgtgtatgcaaaaaccaccctgggacgacttttcatg
gtcttcttcatccttggtggtttggccatgtttgcgagctacgtccctgaaatcatagag
ttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcac
atcgtggtctgtggtcatataacacttgaaagtgtgtccaacttccttaaagacttccta
cacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaat
cttgagctggaagccttgtttaaacgccacttcacccaggtggagttctaccagggatct
gttctcaacccacatgacctggccagagtcaagatagagtcagcagacgcctgtttgatc
ctagctaataaatactgtgcagatcctgatgctgaggatgcctccaacatcatgagggtg
atatccatcaagaactaccacccaaagatcagaatcattacccagatgttgcagtaccac
aacaaggcccaccttttgaacattcccagttggaactggaaggagggtgacgatgccatt
tgccttgctgagctgaagctgggcttcatagcacagagctgtctggctcagggcctgtcc
accatgctggccaacctcttctccatgagatcctttatcaagattgaagaggacacgtgg
cagaagtattacctggaaggagtagccaatgaaatgtacactgagtacctgtctagtgcc
tttgtgggcttatccttcccgaccatttgtgagctctgctatgtgaagctgaagctgcta
ctgattgctatcgagtacaagtctgatataagggaaagcagcaccctcatcaaccctggg
aaccatgtgaagatgcaggaaggaaccctggggttctttatcgccagcgatgccaaagaa
gtaaagagggcacttttttactgcaaagcttgtcacgatgacatcacagatcccaaaagg
ataaagaaatgtggatgcaaacgatccaagatgtccgtctacaagagaatgatgctggca
tgttgttttgattgcggccattcagagtgtgactgctcttgcatgtcagccaatgtgcat
catgatagtaacacaaaggacacccttcagcagcgtggcttccctctctctcctgtctct
cttaatgattgctcaaccactttaagtgcctcaaaaaataactataacggatatatcaaa
tcaatcgaagaggagcagcaaacgacactgtcgcctaaaaagaagcaacgtaatggaaac
acaaggaactcacccaacggttcaccaaaaattatgaggcatgaccctctcctcatgccg
gggaacgaacagattgagaacatggacatgaacgtgaagaagtacgactccacagggatg
ttccactggtgccagtccaaagacatcgagaaggtcatcttgaccagaagtgaagctgcc
atgactgtcctaagcggccacgtggtcgtctgtatatttggagacgcgaagtcggctttg
gtgggcctaaggaaccttgtgatgcctctgagagctagcaacttccactaccacgagctg
aaacccatcgtgtttgtgggttctctggagtacctgaagagggaatgggagacccttcac
aacttccccaaagtctccattttacctggcacaccgttaagccgggccgatctgagggct
gtcaatatcaacctctgtgacatgtgtgtcatcctgtcggccaatcagaacaatattgac
gacgcatcactgcaggacaaggaatgcatcctggcgtcactcaacatcaagtccatgcag
tttgacgacagcatcggggtcttgcaggctaactcccaaggtttcactcctccaggcatg
gacaggtcctctcctgaaaacagtccacttcatggggggttggtcagacaggcttccatc
acaacaggagccaacatccccatcatcactgaactagcaacattatcaaaaacagcaggc
aaagtcctgcctgtggtttcattcagtcaggataaaagcagtgggatcaacgtacaaata
ataacagagctggtaaatgactccaatgttcagttcctggaccaggatgatgatgatgac
cctgacacagaattgtacctcactcagcccttcgcctgtgggacggccttcgcagtcagt
gtgctggattccctgatgagtgcgacatacttcaatgataatatcctcaccctgatccgg
acgctggtaacagggggggccactccggagctggagggtctattggcggaggagaacgca
ttacgaggaggctacagcacgccgcagaccctcgctaaccgggacaggtgtcgtgtggca
cagctagccttgtacgacgggcctttcgctgacttgggagatggtggttgctacggtgac
ttattttgtaaagctttaaaaacttacaacatgctgtgcttcggaatttatcgattaaga
gacgcacatttaaacacacaaagtcatacaagtcaatgcactaaacggtatgtgataacc
aatccgccatatggttttgagttggtgccatcagacctgatcttctgcctgatgcagttt
gatcataatgcgggtcagtccagggccagcctctcccacagctcccactcctcccattct
tccagcaaaaagagctcctccgtccattctctcactgccaccaaccgtaccaaccgcgcc
aagagcagggactcgcgggacaaacagaatgcaacaaggatgaataaaatgggccaagaa
aagacatggtttacagatgagcctgagaatgcggcctaccacaggaacattcacatcaag
ccaatgagtactagtcacagtagtcacacagccaaccaccaggtcaaccagaacccttac
aaatcaaccaacaaccatattccatccatcagagaggtggaggacgaatgctga
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