Salvelinus fontinalis (brook trout): 129862034
Help
Entry
129862034 CDS
T11136
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129862034
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129862034
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
129862034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GldM_1st
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
129862034
NCBI-ProteinID:
XP_055789324
LinkDB
All DBs
Position
9:9757315..9880045
Genome browser
AA seq
793 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKDLSKASHDEAVEAIRSAKDPIAVQVLRRNPVGR
GGHVGSTQEVHVVDVCTQTDITFEHIMALAKLRATTPPVPDICPFLLSDSCHSLHTMEQE
FYEGTDYLSTLPDQQRTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDMTIYVSEVGPN
SIAARDGRIREGDHILQINGQDVQDRKEAVAVLSSEDTRKFLLLVARPEIQLEEAWLDDE
HSEFLEQLKMEMLEEQQREEMELEALQEKAKGEEDDITATCSSRTQDSGLGMSLRNSIDA
PDHNALLTHIQRRLSQCLRDRQNCSTRLDEEEEEEEEEDVAEDGDRFQQLLELKCQIRNS
GEYDLIYSRRSTIECRLGEPAGGVQRELRMLNDELRSIELECQNIMQAHKLGKGPVGSQW
DQGQQVFPQIVCPTPKDQSSHLGCNDSPRRSKLVDINECPEKPEKSDKDSSSAYNTAESS
RSTPLAMDRSPEHSLQRRMVTITNQRNLRSSMASLHTTASPSPKHRPLHWAPIPGKASSP
DHSLYPSESDKVAPADNERSGLGNWKVKPQPPRASQIPYLSPSHDSQHRQPNANIPAHAR
HYQSYMQLIQQRSAAEYAQSQLSLLSGVKEPQLSPAIEPKMEWKVKIRSDGTRYITKRPI
RDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMQR
SRLESLRESPQSSSEGRKEVSIIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPDDPR
AKVHKAFLSVTTV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaaacgagaggaacactataagctgctgtatgag
atcgcacaggtgaatgggaaggacctatccaaggccagtcatgacgaggcagtggaggcg
atccgctctgctaaggaccccattgcggtgcaggtgctcaggaggaaccctgttggccgc
ggtggacatgttggctccactcaggaagtgcacgtggtggacgtgtgcacgcagacagac
atcaccttcgaacacatcatggccctggccaagctccgagccaccacccctcccgtgcct
gacatctgccccttcctgctgtctgacagttgtcactctctccacactatggaacaggag
ttctatgaggggacagactacctctccaccctcccagaccaacagaggacagaggagttt
gagtacgaggaggtggagctgtgtcgactcaacagccaggagaagctgggactgacgttg
tgctacaggacagatgaggaggaggacatgaccatctacgtcagtgaggttgggccaaac
agcatcgctgcaagggatggacgcatcagagaaggagaccacattttacagatcaatggg
caggatgtgcaggacagaaaggaggctgtagcggtgctctctagtgaagatactaggaaa
ttcctactgctggtcgccaggcccgagatacagctggaggaagcgtggttggatgatgaa
cacagtgaattcctggagcaactgaagatggaaatgttggaagagcaacagagagaagag
atggagctagaggcacttcaggagaaggccaaaggagaagaggatgacatcactgccacc
tgttcctccagaactcaggacagcgggctggggatgtcgttaaggaacagcatcgacgcc
cccgaccacaacgccctcctaacccacatccaacgaagactctcccagtgtctgagggac
agacagaactgttccacgcgtctggacgaagaggaggaggaggaagaagaggaggatgtt
gcagaggatggcgatcggttccagcagctcctggagctgaagtgtcagatccgtaacagc
ggagagtacgacctgatctatagcagacgcagcactatagagtgtaggctgggagagccg
gccggtggcgtgcagcgtgagctccgcatgctcaacgacgagctccgtagcatcgagcta
gagtgccagaacatcatgcaggcacacaagctcggcaaggggccggtggggtcccagtgg
gaccaggggcagcaagtgtttccccaaattgtctgccccacacccaaggaccaaagctcc
cacctggggtgcaatgactcacctagaagaagcaaactggtggacatcaacgagtgtccg
gagaagccggagaagtcagacaaggacagctcgagtgcctacaacactgcagagagctct
cgcagcacgccgctggcaatggaccgctcccctgagcactcccttcagaggaggatggtg
accatcaccaaccagaggaacctccgcagcagcatggccagcctccacactacagccagc
cccagccccaaacaccggcccctccactgggcccccatcccaggcaaggccagcagcccc
gaccacagcctttacccctccgagtcggacaaggtggcccctgcagacaacgaaaggagt
gggttggggaactggaaggtgaagcctcagcctcccagggcctcccagatcccttaccta
tccccgtcccatgactcccagcaccgccagcccaacgccaacatcccggcccacgctcgc
cactaccagagctacatgcagctgattcagcagcgctcggctgcggagtacgcccagagc
cagctgagcctgctcagtggagtcaaggagccccagctgagccccgccatcgagcctaag
atggaatggaaggtgaagatccgttcggacggcacgcgctacatcaccaagagacccatt
agggacaagatcctgcgggaacgcgccctgaagatcaaagaggagcgtagcggagggatg
accaccgacgacgacgctatgtccgagatgaagatggggcggtactggagtaaagaggag
aggaagcagcatctggtcagggctaaagaacagcggaggagacgggagttcatgcagcgc
agccgactggagagcctgagggagagtcctcagagcagcagcgaaggacgcaaggaggtc
agcatcattgaactgagccacaggaagatgatgaagaagcgcaacaagaagatcctggac
aactggatgaccattcaggaactgatgactcacggggccaaggcccctgatgaccccagg
gcaaaagtacataaggccttcctgtcggtcaccactgtataa
DBGET
integrated database retrieval system
