Salvelinus fontinalis (brook trout): 129862085
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Entry
129862085 CDS
T11136
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B
KO
K16482
centriolar protein POC1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129862085 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129862085 (poc1b)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
129862085 (poc1b)
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129862085 (poc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_RIG_2nd
DSE1_N
CFAP251_N
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
ASA1
Beta-prop_Vps41
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_2nd
eIF2A
Ge1_WD40
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
WD40_like
TolB_like
DUF6986
THSD1_N
IOR_2
HAT
Motif
Other DBs
NCBI-GeneID:
129862085
NCBI-ProteinID:
XP_055789410
LinkDB
All DBs
Position
9:complement(13097872..13150660)
Genome browser
AA seq
511 aa
AA seq
DB search
MASVMEDPTLERHFKGHKDAVTCADFNSNHKQLASGSADKTLMIWNLNPKARAFRFFGHK
DVITGVQFSPVGDLVVSASQDKTVRLWTPSIKGESMVFKAHTATVRSVSFSHDGQRLVTA
SDDKSVKVWSVHRQRFVYSLNQHTNWVRCARFSPDSRLIASCGDDRTVRLWDTSTKQCIN
CFTEYGGSATFVDFNTSGTCIASSGADNTLKIWDIRTNKLLQHYQVHSAGINCFSFHPSG
NYLISGSSDSTVKILDLLEGRLIYTLHGHKGPVLTVAFSRGGDFFASGGCDAQVLMWKTN
FDSFDYREVLSKHSQRVTPDPPPHLTDIYPRGPHLHSAQSGAIEISPMVADTQTIAPAVI
EVGQALYTATTAVNGHANNLPARRIASTSLNPNEDCHSSGQGSTSGSQSGQMGGRREEEG
EQGMTYPLEMRSDLPMNFSSTLERIVQQLDVLTQTVSVLEERLTLTEDKLKECLFNQSQI
LLQVRGEEKDRRGARVEEEREGESGSPVASA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttatggaggaccccaccctcgagagacacttcaagggccacaaagatgct
gtcacctgtgcagacttcaattccaatcacaaacagctggcctcagggtctgcagacaag
accctgatgatttggaatctgaaccctaaggccagggcgttccgtttttttggacacaaa
gatgtcatcacaggggtccagttctctcctgtgggagatctggtcgtctctgcatcccag
gacaagactgtacggctgtggacgcccagcattaaaggagagtcgatggtgttcaaagcc
cacacggctacagtacgcagtgtcagcttttctcacgacggccagaggctagtgactgcg
tcagacgacaagtctgtcaaggtgtggagtgtccacagacaacgttttgtctactcactc
aaccagcacaccaactgggtccgctgcgccaggttttctcctgacagccgtctaattgcc
tcctgtggtgacgaccgcacagtgcggctgtgggacacctccaccaaacaatgcatcaac
tgcttcacagagtatggaggatcagcaacatttgtagacttcaacaccagtggcacctgc
atagcatcctcaggagcagacaacacgctgaagatctgggacatacggacaaacaaactg
ctccagcattaccaagtccacagtgcagggatcaattgcttttccttccacccgtctgga
aactatctgatcagtggctccagtgacagcacagtgaagatcctggacttgctggaggga
cgcctcatctacaccctccacggacacaagggtcctgtcctgactgtggccttctccagg
ggaggagacttctttgcctcagggggttgtgatgctcaggttttaatgtggaagaccaac
tttgattcttttgactaccgtgaggtcctgagcaaacacagccagcgggtcacccccgac
ccccctcctcacctgacagacatctacccccgaggacctcacctccactccgcccagtct
ggggctatagagatcagtcccatggtggcagacacccagaccattgccccagcggtcata
gaggtgggccaggccctctacacagccactacggctgtcaacggccatgcaaacaatttg
ccagcacggcggattgccagtaccagcctcaaccccaatgaagactgtcacagtagtgga
cagggttcgacatctgggtcccagtccgggcagatgggaggcaggagggaggaggagggg
gaacaggggatgacgtaccctctggagatgcgctcagacctccccatgaacttcagcagc
accctggaacgcatcgtccagcagcttgacgtcctcactcagactgtctctgtgttggaa
gaacgtctcaccctgacggaggacaaactgaaggagtgtttattcaaccagagtcagatc
ctgctgcaggtgcgaggggaggagaaggaccgaaggggagcgagggtggaggaagagagg
gaaggtgagagcggatcccctgtcgcctcagcctaa
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