Salvelinus fontinalis (brook trout): 129862128
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Entry
129862128 CDS
T11136
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129862128 (tdrd12)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
129862128 (tdrd12)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129862128 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129862128
NCBI-ProteinID:
XP_055789472
LinkDB
All DBs
Position
9:complement(14722285..14763814)
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AA seq
1530 aa
AA seq
DB search
MLEINLLKVENPSCLWGRFVKGPGIEAAENKKEYDDLQMKMNLFYHEVNLDVQKIKPSTI
ESGQVCVVYWSTLRSWCRAIVESLFLGTVGTQAMCFLVDHGERVIVSSDEIRALLDTFLQ
LPFWVRKFQLAGVHPMTLHVSGDCLEKAELIPSTQWDSSATRYLHNLLQASTEMEAVLCE
TQADCTAIELYLTVKNVKICVNDDLVSKKFAYFTSQKAHQTSGKNGVVDRSPAVLACDIF
SETQNFLATDGCTVRSLSDFLLRQQDPIVHNQVADQCQLTTSVKDASKASNEVSNPKKSL
ENGRNPLEGGKKKAAQPQNKKFKTFSEIDGDEDESDEEPGEDTDTSLVSELLKNLDLLRF
KKFLNPASSTQRAAIPKTALIEQKEEHGVQRISALTEKAEKEPVTAPQQIGQQTETAVCT
PSDLVDRTQEFVFTEQPTIEEELVCARLLQLLNPDPLNPDVYSSEVTIVHTDPSRSGIMV
HSAFTLDPCTSLANAPITDTFRRILMRKKYAGPSVSESYCWPAVARGCDTVLISHSGDQP
LTYIPPFLAHMQLSSVFSALSSRTGPIAVILCPGWEKAQTVIDLLEESQTVQVLHPMVIL
LGLGKDEAKTVKIQNNCQVVVTTPFSLVRLLRLHCFLFLRLCHLALDEVDLLFSRAPDEM
TTILQHFQRVTASEERVSCPRQIIAVGKHWSRHLEGLLHNHMNNPTVVVTVMEEAALYGN
VHQIILLCLDCTKISVLLGALDFTPDVAQKTLVITNSAEEAEHVFKAVSNTSAFSLKAHE
ELTYQFDFVTEQWKKPIGPGTHVILVTTNECMKSLGICDATCVVHYGFPSSPKLFGSRLF
CMSQNFQNLSDKERAAESTAHPAKSVLLLSERNARHVIGVLRYLKRTDASLPPELLQFAQ
GVLRAKEEQKSDRPLCRYLKSFGFCRDSSVCSYRHSISPITDQPLQPDSGTIVVLPLFIK
TASVYYGRIVSKKEDRYESLAAAMTTYYSAEKLGAKEVLEGGLYGVQEDEVYHRVRVTSV
PDKGEWMFCSVRALFLDEGREQEVKSHQLLQLPAQFHILPPQALEIIVCRAMPIDAEVKW
NPKVTRAISQKIKGLQHQAKVVLCLGNTVFVDPMVRMTRLPGLKTLINECNVHAEILSTG
MGTSNPQHLDLLKELCHGAGPGASAGDALLTTVPDGSGVTLEEKVQAAEEALVHRMRAAV
ERLHCGQEVSVDPPQTQTSVLHAQTDLSQCHMKASADLHQMDQKVFAHAPQPWMNDVFVY
PTQLSPKPQEAPLAAVPDPSEAQLPTLMDRVQITSPLPTPSEAQISAPLPTISEPQLPAP
TTAHNDPKMEQWRSLIANLQGATQTRRHTALQGFTPKDWISAVPRPIENGHLIDEKQVNG
QQVINGEKVISVDVDAPKSFHPQIKWFQRDDTVTLNIKLREPVDQRCEFFPDRVVYSACV
NDRPYRAHLELHSNITAERCSWEMKCNEPVIRLVKQERGDWKMLLKQKSAFVSLDFDRFE
EDEKKTSNGLCFVGHTGEEGCYVSSDSSSD
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaataaatttgttgaaagtggagaacccgtcctgtctgtggggtcggtttgtg
aagggtccagggatagaagcggccgagaataaaaaagaatatgatgatctgcaaatgaaa
atgaaccttttctatcatgaggtcaacctagatgtgcagaagatcaaaccctcaactata
gagtcgggacaggtgtgtgtggtgtactggtctaccctaaggagctggtgccgagccatc
gttgagtctcttttcctgggcaccgttggaacccaggccatgtgtttcctagttgaccac
ggagagcgcgtcatcgtcagctcagatgagattcgggctctgttagatacgtttttgcag
ctgcccttctgggtgaggaagtttcagctcgctggtgttcatcccatgacgctgcacgtg
tctggagactgcctggagaaagctgagctcataccatcaacgcaatgggacagctctgcc
acacgctatttgcacaatctcttacaagcttctaccgagatggaggcagtgttgtgtgaa
acacaggcagattgcactgccattgagctctacttgactgtcaaaaatgtcaagatctgt
gtgaacgacgatctggtctcaaagaagtttgcgtacttcacaagccagaaggcccatcaa
acaagtgggaaaaatggtgttgttgatagatccccagccgtcttggcatgtgacatcttt
tctgaaactcagaacttcctggctactgacggctgcaccgtacgatcactttcagatttc
ctgctccggcagcaggacccaatcgttcataatcaagtggctgatcagtgccagctaacg
acatctgtgaaagacgcatcgaaggcttccaatgaggtatcaaatccaaagaaaagccta
gaaaatggaagaaatcccttagagggaggaaaaaagaaggcagcccagccgcagaacaag
aaattcaagacgttttcagagattgatggcgatgaagacgagagcgacgaggagcccgga
gaggacaccgacacatctcttgtgtcagaactgttaaaaaatctggatctgttaagattc
aagaagtttctgaatcctgcttcgagcactcaaagggctgctattcccaaaactgcgctt
attgaacagaaggaggaacatggtgttcagaggatctctgcgctcacggagaaagcagag
aaagagccagtcactgcacctcaacagatcggacaacagactgaaacggctgtatgtact
cctagtgacctagtagaccggacacaagagtttgtcttcacagagcagccaaccattgag
gaggagctcgtctgcgctcggttgttgcagttgctaaatcctgaccctctgaacccagat
gtatactcatcagaagtcactatcgtccatactgatccaagcaggagtgggataatggtg
cattctgcctttactctggacccctgcaccagtctggccaatgctccaatcactgacacc
ttccggaggatcttgatgaggaagaagtatgccggcccgtctgtgtctgagagttactgc
tggccggcggtggccaggggctgtgacacggtcctcatctcccacagcggagaccagccc
ctcacctacatccccccgttcctggcccacatgcagctctcctccgtcttcagtgccctc
tcttctcgcaccgggcccatagctgtgatcctgtgcccggggtgggagaaagcccagact
gtgattgacctgctggaggagagccagaccgtccaggtcctccaccccatggtcatactg
ttgggactgggaaaggatgaggcaaagaccgttaagatccagaacaactgccaggtggtg
gtgaccactccgttcagccttgtgcgtctgctgcgtttgcactgtttcctgttcctgcgg
ctgtgtcacctggcgctggacgaagtggacctgctcttttctagagccccggacgagatg
accactatcctgcagcacttccagagggtgacggccagtgaggagcgtgtgtcgtgcccc
agacagatcatcgcagtgggaaagcactggagccgccacctggagggcctgctccacaac
cacatgaacaaccccaccgttgtcgtcacggtgatggaggaggccgcactctacggcaat
gtgcaccagattatcctgttgtgtctggactgcactaagatctctgtcctgctcggggcg
ctggacttcacccccgacgtggcccagaagaccctcgtcatcaccaactctgctgaggag
gccgagcatgtcttcaaggctgtttcaaacacatcagcgttctccctgaaggcccacgag
gagttaacctaccagtttgactttgtgactgagcagtggaagaagcccattggacctggc
actcatgtcattctggtcaccaccaatgagtgtatgaagtctttgggtatctgtgatgct
acgtgtgttgtgcactacggcttcccaagctcacctaagctgtttggcagccgtctgttt
tgcatgtcccagaacttccagaacctttcagacaaggagcgtgctgcagagagcacggcc
caccctgccaagtcagtgctgctgctatctgagaggaatgcccgtcacgtaatcggggtc
ctgcgctacctaaagcgtactgatgcctcgctccctccagagctgctgcaattcgcccag
ggagtcctgcgtgccaaggaggaacagaagtctgataggcctctgtgcagatacctcaag
agctttggcttctgtagggacagcagtgtttgttcttatcgacacagcatcagccccata
acagaccagccactgcaaccagactctggaactattgtggttctgcccttgttcatcaag
actgcttccgtctactacggacgcattgtgagtaagaaggaggaccgttatgagagcctg
gcagcagcaatgactacatactactccgctgagaagctgggtgctaaggaggttctggag
ggagggctgtacggagtacaagaggatgaggtctaccacagggtgcgggtgacttcggtg
ccggacaagggtgagtggatgttctgcagcgtgagggctctgttcctggatgaggggcgt
gagcaggaggtgaagtcccaccagctgctgcagctgccggcccagttccacatactgccg
ccccaggctttggaaatcatcgtctgcagggccatgcccatcgacgctgaggtcaaatgg
aaccccaaggtcaccagggccatcagtcagaagatcaaaggcctgcagcaccaagccaag
gttgttctgtgtttgggaaacacggtcttcgtcgatcccatggtgcggatgacccgacta
ccaggcctgaagaccttaataaatgaatgcaacgtccacgctgagatccttagcacgggg
atgggcaccagcaaccctcagcacctggacctgctgaaggagctctgccacggggctggg
ccaggagccagtgctggggatgccctgctcaccacggtgccggatggctctggggtgacc
ttggaggagaaggtgcaggctgcagaggaggccctggtccacaggatgagggcagctgtc
gagcgcttacactgtggccaggaggtttctgtagacccaccccagacccaaacgtctgtg
cttcatgcccagacagacttgtcccagtgccatatgaaggcctcagcagatctgcaccag
atggaccagaaggtctttgctcatgcaccccagccttggatgaacgatgtctttgtatac
ccgacccagctctcgcccaagccacaggaggccccattagcagcagttcctgatccgagc
gaggctcaactaccaacactcatggacagggtccagataacttcccctctcccaacacct
agcgaagcccagatatctgccccactcccaacaattagcgagccacagttacctgcccca
acaactgcgcacaacgaccccaaaatggagcagtggaggagcctcatagctaacctccaa
ggtgccactcaaacacggaggcatacagctctacaaggattcacccccaaagactggatt
tctgcagttccccgccccattgaaaatggtcatttgattgatgagaagcaagtcaacggc
cagcaagtcatcaacggtgagaaagtcatcagtgttgatgtggatgcaccaaaaagtttc
catccacagatcaagtggttccagagagatgacacagtcacactgaacataaagctcaga
gaaccagtggatcagagatgtgaattcttccctgacagagtggtgtacagtgcgtgtgtg
aatgacaggccttatcgtgctcacctggagctccacagtaacatcactgcagagaggtgc
tcctgggagatgaagtgcaatgagccagtcatcaggctcgtcaaacaggagaggggagac
tggaagatgctcctcaagcaaaagagtgcttttgttagtttggatttcgaccgatttgag
gaagatgaaaagaagacttcaaatggtctctgctttgtggggcacactggggaggaaggc
tgctacgtgagctcagacagtagcagtgactga
DBGET
integrated database retrieval system
