KEGG   Salvelinus fontinalis (brook trout): 129862139
Entry
129862139         CDS       T11136                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04510  Focal adhesion
sfon04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129862139
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129862139
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C
Other DBs
NCBI-GeneID: 129862139
NCBI-ProteinID: XP_055789488
LinkDB
Position
9:complement(15159737..15196508)
AA seq 1785 aa
MLIFQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSANSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVSSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGGCYCK
RLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRGPTWTGIGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGD
LATSSAWDTFQRYRCLENSQSVVKTPSTDICHNFIFSISALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHAFCHEATGQCACIP
GAYGRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLNCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICSPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVSNCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKKGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGNCVCLEGVSGPRCNLCARGYSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHAIDNMEQSAGSIRTILAQNPATQPLSEIQQLLEQATDLMEEMSN
KLNLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHAKRLDDLA
DQLETLDLSELSEKTCGSPAGEACVDSPCGGLSCVDSEGNRRCGGEGCDGLVTLANNAWH
KANHFDQEILTAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNETKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
HSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKALNTSLSSEQTERDAESINKV
AEQVKKDLDSELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgttgatatttcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccagagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctctgccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgtcagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagcgtggttaacgccaccaccggccaccgagtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggctgactttgggaagaactggcag
gtgtaccgttacttcgcctacgactgtgagtcagcattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
accctgggagacaacctgctggactcccgcatggagatcaaggagaagtactactatgct
gtctacgacttggtggtacggggtaactgcttctgctacggacacgcctctgagtgcgcg
cccgtcgatggggctggggatgttgttgagggaatggtccatggccactgtatgtgcaac
cacaacaccatggggttgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaatggtgggatctgtgacaggatgactgatgtgtcgtctggactg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccactacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgatacagactcgggaggctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaagagactggtcagtgtgtgtgtcgagaacacatgtttggccggcgctgtgaccag
gtggagtcaggcttctacttcatcgccctggaccactacacctacgaggcagaggatgcc
aaatttggacctggtgtgacagtagtgcagagaccccaccctcaggaccgtggccccacc
tggacagggataggtttcgtcaatgttcccgagggggcctacctggagttctccattgac
aacatcccccactccatggaatatgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggctctgagggcggtgac
ttggccaccagcagtgcctgggacaccttccaacgctaccgctgtctggagaacagtcag
agcgtagtgaagaccccgtccacagacatctgccacaactttatcttcagcatatccgct
ctgctgcaccagggagctaaagcatgccagtgtgatccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttcccctgccacctacctctttggacccagtggctgtagatcctgtgattgcaat
ccccagggatcggagcatgcgttctgccatgaggctactggccagtgtgcttgtatcccc
ggggcgtacggccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacactgagcagtgtgacccctactctggagaatgcctg
aactgccgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactatggc
gaccctgtcctgggttcaggggatcactgtcgtccctgtatgtgtccggacgggccaggt
agcgggcggcagtttgccggtggatgttatcacggtctggactctcactaccaggtgttt
tgtatctgcagccctggatacagaggtgccagatgtgaggaatgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacaggtgaatgtctcaaatgtctctaccac
accgagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
agcaactgccactgtgatctgggcagtgggcagtgccagtgtctaccaaatgtggtgggt
cagcactgtgaccagtgtgcccccgacacctggaacatggccagcaagaagggctgcgaa
tcttgcgactgtgaccccaaccactcatttggaacgtcctgcaacgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagttgttctgg
ggagaccctgaagtcaaatgcaatgcgtgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtaactgtgtgtgcttggagggcgtgtctggtccccgctgt
aacctctgcgcccggggctactctggcaccttcccctactgcgaacgctgccaccagtgc
ttcgccgactgggacgtgatcgtaggtcagctgaccaatcagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccatacaaacatgccatagataac
atggagcagagcgccgggtccataagaactatcctggcccagaacccggctacacagcca
ctgtcagagatacagcagctactggagcaggccacagatctaatggaagagatgagcaac
aagctgaacctcactgaggaggcgttggcccaggtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggaccaagtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggctcaggccaacgcctccaccaccgaccca
ggcaaccccgtagagagctcttttgttctaagacaagctacggaggacaagatgaacgac
accagggacgagttccacaggaggcaggaagaacacgccaagagactggatgacctggcg
gatcagctggagacattggacctatcagaactcagtgagaagacgtgcggcagcccagct
ggtgaggcgtgtgtagactctccgtgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggcgaggggtgtgacggtctggtcaccctggccaacaatgcctggcat
aaggccaaccactttgaccaggagatcctcacggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagatgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaatgagaccaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgcgagacctggcccaagtggagactatcctcaac
cacagcgctgacgacgtgcagagagccgagaacctactgaagcaggcaggcagagccagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggccaccacagacattaaaggc
acaaacgacctcctgtcctcagtggagtcggagacagcggactcagagttcaagctgaac
aacgccacccagaggctgctgtggttagagaaagacatcacactgctcagagagaaggca
ctgaacacctcgcttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggactcggagctgaaggataagtacagcaccgtgcag
gacctgatcaaacaggaggccgggggcgtggccgatgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaagctgcagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtcaaagagctgctgcaggagatcagtcacaaagtcaccgtgtac
agcacctgtctgttttaa

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