Salvelinus fontinalis (brook trout): 129862139
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Entry
129862139 CDS
T11136
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129862139
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129862139
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
129862139
NCBI-ProteinID:
XP_055789488
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All DBs
Position
9:complement(15159737..15196508)
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AA seq
1785 aa
AA seq
DB search
MLIFQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSANSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVSSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGGCYCK
RLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRGPTWTGIGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGD
LATSSAWDTFQRYRCLENSQSVVKTPSTDICHNFIFSISALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHAFCHEATGQCACIP
GAYGRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLNCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICSPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVSNCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKKGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGNCVCLEGVSGPRCNLCARGYSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHAIDNMEQSAGSIRTILAQNPATQPLSEIQQLLEQATDLMEEMSN
KLNLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHAKRLDDLA
DQLETLDLSELSEKTCGSPAGEACVDSPCGGLSCVDSEGNRRCGGEGCDGLVTLANNAWH
KANHFDQEILTAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNETKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
HSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKALNTSLSSEQTERDAESINKV
AEQVKKDLDSELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatttcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccagagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctctgccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgtcagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagcgtggttaacgccaccaccggccaccgagtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggctgactttgggaagaactggcag
gtgtaccgttacttcgcctacgactgtgagtcagcattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
accctgggagacaacctgctggactcccgcatggagatcaaggagaagtactactatgct
gtctacgacttggtggtacggggtaactgcttctgctacggacacgcctctgagtgcgcg
cccgtcgatggggctggggatgttgttgagggaatggtccatggccactgtatgtgcaac
cacaacaccatggggttgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaatggtgggatctgtgacaggatgactgatgtgtcgtctggactg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccactacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgatacagactcgggaggctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaagagactggtcagtgtgtgtgtcgagaacacatgtttggccggcgctgtgaccag
gtggagtcaggcttctacttcatcgccctggaccactacacctacgaggcagaggatgcc
aaatttggacctggtgtgacagtagtgcagagaccccaccctcaggaccgtggccccacc
tggacagggataggtttcgtcaatgttcccgagggggcctacctggagttctccattgac
aacatcccccactccatggaatatgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggctctgagggcggtgac
ttggccaccagcagtgcctgggacaccttccaacgctaccgctgtctggagaacagtcag
agcgtagtgaagaccccgtccacagacatctgccacaactttatcttcagcatatccgct
ctgctgcaccagggagctaaagcatgccagtgtgatccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttcccctgccacctacctctttggacccagtggctgtagatcctgtgattgcaat
ccccagggatcggagcatgcgttctgccatgaggctactggccagtgtgcttgtatcccc
ggggcgtacggccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacactgagcagtgtgacccctactctggagaatgcctg
aactgccgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactatggc
gaccctgtcctgggttcaggggatcactgtcgtccctgtatgtgtccggacgggccaggt
agcgggcggcagtttgccggtggatgttatcacggtctggactctcactaccaggtgttt
tgtatctgcagccctggatacagaggtgccagatgtgaggaatgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacaggtgaatgtctcaaatgtctctaccac
accgagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
agcaactgccactgtgatctgggcagtgggcagtgccagtgtctaccaaatgtggtgggt
cagcactgtgaccagtgtgcccccgacacctggaacatggccagcaagaagggctgcgaa
tcttgcgactgtgaccccaaccactcatttggaacgtcctgcaacgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagttgttctgg
ggagaccctgaagtcaaatgcaatgcgtgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtaactgtgtgtgcttggagggcgtgtctggtccccgctgt
aacctctgcgcccggggctactctggcaccttcccctactgcgaacgctgccaccagtgc
ttcgccgactgggacgtgatcgtaggtcagctgaccaatcagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccatacaaacatgccatagataac
atggagcagagcgccgggtccataagaactatcctggcccagaacccggctacacagcca
ctgtcagagatacagcagctactggagcaggccacagatctaatggaagagatgagcaac
aagctgaacctcactgaggaggcgttggcccaggtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggaccaagtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggctcaggccaacgcctccaccaccgaccca
ggcaaccccgtagagagctcttttgttctaagacaagctacggaggacaagatgaacgac
accagggacgagttccacaggaggcaggaagaacacgccaagagactggatgacctggcg
gatcagctggagacattggacctatcagaactcagtgagaagacgtgcggcagcccagct
ggtgaggcgtgtgtagactctccgtgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggcgaggggtgtgacggtctggtcaccctggccaacaatgcctggcat
aaggccaaccactttgaccaggagatcctcacggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagatgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaatgagaccaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgcgagacctggcccaagtggagactatcctcaac
cacagcgctgacgacgtgcagagagccgagaacctactgaagcaggcaggcagagccagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggccaccacagacattaaaggc
acaaacgacctcctgtcctcagtggagtcggagacagcggactcagagttcaagctgaac
aacgccacccagaggctgctgtggttagagaaagacatcacactgctcagagagaaggca
ctgaacacctcgcttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggactcggagctgaaggataagtacagcaccgtgcag
gacctgatcaaacaggaggccgggggcgtggccgatgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaagctgcagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtcaaagagctgctgcaggagatcagtcacaaagtcaccgtgtac
agcacctgtctgttttaa
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integrated database retrieval system